Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00884	ATGACAAAAGGATCGGTTTCTTTCTTTGCATTCCTTTTGTTCCTCTTCATTCTTGCCATCTCAGAAATAAAGGCGACCTCGGAGCCTCCGGAGCCTAAAAGATTATGTGAAAAGCCAAGTAAAACATGGTACGGGAAATGCGACAATGACAAGTGCGACAAAAAGTGCATATCTTGGGAGTTTGCACTCCATGGAGCTTGTCATGTGCGCGAATCCAAAGAGGGTTGCTTCTGCTACTTTTTGTGTCACAAGAAGCCTCCAAAACACAAGTCTCCACCAAAAGATAAGTCACCACCACCCAAAGACGGGTCTCCCCCACCTCCTCCTGATGGTGGTTCATCGCCTCCTCCAAAAGACGGGTCTTCCCCACCTCCTGCTGACGGGGGTGGTTCATCGCCTCCTCCAAAAGACAAGTCTCCACCAAAAGACAAGTCACCACCACCCAAAGACGGGTCTCCCCCACCTCCTCCTGACGGTGGTTCATCGTCTCCTCCAAAAGGCGGGTCTTCCCCACCTCCTGCTGACGGTGGTTCATCGCCGCCACCTTCTAAAGGCGGATCGCCCCCGTGTTCATGTCCACCTCCCAAACACGAAAAGCCTAGTCAAGAAAATACAAAATAA	621	50.89	MTKGSVSFFAFLLFLFILAISEIKATSEPPEPKRLCEKPSKTWYGKCDNDKCDKKCISWEFALHGACHVRESKEGCFCYFLCHKKPPKHKSPPKDKSPPPKDGSPPPPPDGGSSPPPKDGSSPPPADGGGSSPPPKDKSPPKDKSPPPKDGSPPPPPDGGSSSPPKGGSSPPPADGGSSPPPSKGGSPPCSCPPPKHEKPSQENTK	206

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00884	206	PANTHER	DEFENSIN-LIKE PROTEIN 1	4	82	-	GO:0006952(PANTHER)
	Armi1g00884	206	MobiDBLite	consensus disorder prediction	146	196	-	-
	Armi1g00884	206	Pfam	Gamma-thionin family	34	82	-	-
	Armi1g00884	206	MobiDBLite	consensus disorder prediction	98	136	-	-
	Armi1g00884	206	SUPERFAMILY	Scorpion toxin-like	34	82	IPR036574	-
	Armi1g00884	206	SMART	gth-4	35	82	IPR003614	GO:0006952(InterPro)
	Armi1g00884	206	MobiDBLite	consensus disorder prediction	87	206	-	-
	Armi1g00884	206	Gene3D	-	32	82	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00884	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:23493366	Armi1g00893	Armi-Chr1:23679084	dispersed
	Armi	Armi-Chr1:23459987	Armi1g00884	Armi-Chr1:23493366	proximal
	Armi	Armi-Chr1:23493366	Armi1g00886	Armi-Chr1:23545065	proximal

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Armi1g00878	.	1	76	Plant Defensins gene family	AT1G19610	46.053	1.79e-18	71.6
	Armi1g00882	.	1	78	Plant Defensins gene family	AT1G19610	51.282	5.90e-26	90.9
	Armi1g00884	.	5	78	Plant Defensins gene family	AT1G19610	45.333	1.02e-14	65.1
	Armi1g00885	.	4	78	Plant Defensins gene family	AT1G19610	32.911	2.92e-08	46.6
	Armi1g00886	.	6	78	Plant Defensins gene family	AT1G19610	49.315	1.83e-21	80.9
	Armi1g00887	.	27	78	Plant Defensins gene family	AT1G19610	46.154	7.90e-13	58.2
	Armi1g00893	.	10	78	Plant Defensins gene family	AT1G19610	52.174	9.44e-24	92.0
	Armi1g00897	.	1	77	Plant Defensins gene family	AT1G19610	50.649	6.96e-26	90.9
	Armi2g03764	.	11	77	Plant Defensins gene family	AT2G02130	36.62	5.44e-11	51.2
	Armi3g03838	.	1	77	Plant Defensins gene family	AT2G02100	65.385	1.36e-32	106.0
	Armi5g00203	.	23	77	Plant Defensins gene family	AT2G02130	61.818	8.80e-21	76.6