AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00930 ATGGTGTTGCGGCTTGTTTTCTTGGCTCTCTTTTCACTCGTTATGATCACAATTTCTATAGAAGCTAGGCCAAATCCTGAAGAATACCAGCAAGAGTCGTTTGTTGGAGGGGATACTTGGGTGTCACCTCTCCCCACCAAGAAAAGTCATTGTCACACATTGACCAAGGAAAAAGACCTCAAATTTTCCTTCAATGACAAGGATGTGAATCCAGATGGCGACAAGAAAAATAAGAGAAGTTTTGACAAAGATTTTGAGCCAAGACCTGATGTTACGGTTTACGATAATGGAACAGGTTTGAAAGGTAAGAGAAGTTTTGACAAAGATTTTGAGCCGAGACCTGATGTTACGGTTTACGATAATGGAACAGGTTTGAAAGGTAAGAGAACTTTCGATAAATATTTCGAGCCAAGGCCTGATGTCACGGTTTACGATAATGGAACAGGTTTGAAAGGTAAGAGAACTTTCGATAAAGATTTCGAGCCAAGACCTAATGCAACGGTTTATGATAATGGAACAGGTTTGAAAGGTAAGAGAACTTTCGATAAAAATTTCGAGCCAAGACCTGATGTCACAGTTTACGACAATGGAACAGGTTTAAGAGGTAAGAGAACTTTCGATAAAGATTTTGAGCCGAGACCTGATGTCACAGTTTACGACAATGGAACAGGTTTGAAAGGTAAGAGTATTTTTGATGAAGACAAAGTTATAGCAAGTGTTACAGATTATAACTATGTGTAA 741 38.87 MVLRLVFLALFSLVMITISIEARPNPEEYQQESFVGGDTWVSPLPTKKSHCHTLTKEKDLKFSFNDKDVNPDGDKKNKRSFDKDFEPRPDVTVYDNGTGLKGKRSFDKDFEPRPDVTVYDNGTGLKGKRTFDKYFEPRPDVTVYDNGTGLKGKRTFDKDFEPRPNATVYDNGTGLKGKRTFDKNFEPRPDVTVYDNGTGLRGKRTFDKDFEPRPDVTVYDNGTGLKGKSIFDEDKVIASVTDYNYV 246
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00930 246 Pfam Organ specific protein 174 220 IPR024489 -
Armi1g00930 246 Pfam Organ specific protein 54 145 IPR024489 -
Armi1g00930 246 Pfam Organ specific protein 124 170 IPR024489 -
Armi1g00930 246 MobiDBLite consensus disorder prediction 66 90 - -
Armi1g00930 246 MobiDBLite consensus disorder prediction 66 98 - -
Armi1g00930 246 PANTHER PROTEIN, PUTATIVE-RELATED 132 196 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00930 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:24816398 Armi1g00934 Armi-Chr1:24957777 proximal