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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00936 ATGCCTCATGGATTTGCATCTTGGCTCCTAATCCTTCATCTTCTTATTTCTCTGCATGCTGAAGGAGGTGAAGCTATAAGATCTAATGTCATAAGACTCAATACTATGGATGATGATGCTAATAACATCCATCATCATGATCATATGCACCAAGACCATGGCCATGGTCATCCATCATCATCATCGACAAATCAAATCGACCCTCAAGTCATGGTTTTCTTCATGTTACAAGACTTAATAGTAGGTCAAGTGATGCCAATTTACTTCCCAAACCGACACATTTCCCCGTCTCAACTCCTCCCAAAACACGAAGCCGATAACATCCCTTTTTCGGTTGCTGAATTACCGAACCTCCTTCGATTGTTCTCATTCTCACAACACTCTCCACAAGCCAAAGCCATGGAAAGCACACTCAAAGAATGTGAGGTCAAACCCATAAAGGGCGAGACCAAGATTTGCGCAACCTCGTTGGAATCCGCACATGACTTCGCACACGGAATCTTTGGATTCGACACTCAAGTCAAGACTTTGACCACAACCCACCTCAAGAATTCAACAATTGGACTTTTACAAAACTATAAAGTGATTGAAATCTTGCAAAATACACCTTCTCCAAAACTAGTGGCTTGCCACACATTGCCATACCCATATGCAGTGTTCTATTGCCATAGCCAAGAGAGCGAAAACAAGGTGGTTATGGTTTCATTAGAAGGTGAAGATGGCGATTTGGTTGAGGCTTTGGGTGTTTGCCACATGGACACGTCTCATTGGAACCGCGATCACGTGTCGTTTAGGGTTCTTGGGGTTGAACCAGGAACCACTCCGGTTTGCCACTTCTTTCCGAGTGATAATTTTGTTCTTATACCTTTTTCTGCAACGATGTAA 885 43.16 MPHGFASWLLILHLLISLHAEGGEAIRSNVIRLNTMDDDANNIHHHDHMHQDHGHGHPSSSSTNQIDPQVMVFFMLQDLIVGQVMPIYFPNRHISPSQLLPKHEADNIPFSVAELPNLLRLFSFSQHSPQAKAMESTLKECEVKPIKGETKICATSLESAHDFAHGIFGFDTQVKTLTTTHLKNSTIGLLQNYKVIEILQNTPSPKLVACHTLPYPYAVFYCHSQESENKVVMVSLEGEDGDLVEALGVCHMDTSHWNRDHVSFRVLGVEPGTTPVCHFFPSDNFVLIPFSATM 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00936 294 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 46 289 IPR044816 -
Armi1g00936 294 SMART BURP-2 71 290 IPR004873 -
Armi1g00936 294 ProSiteProfiles BURP domain profile. 73 290 IPR004873 -
Armi1g00936 294 MobiDBLite consensus disorder prediction 42 63 - -
Armi1g00936 294 Pfam BURP domain 72 288 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00936 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:25027232 Armi1g00952 Armi-Chr1:25700353 dispersed