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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00953 ATGGATAGCATCGTAGACGCTTTAGACAACGCTTATCAAGAATTTGTGGGTGCGGTAGCTAGCACACTTGAAGCCAAGGAGGCCTCTGGTGGCCAGGTCACCGTTGCCACAGATGCTGCCCTAGAGAACCTGAAACAGAGGTGGGAGTTGTTTCGCGTGGCCTGTGATCAGGCTGAGGAGTTTCTTGAGTCTGTGAAACTAAGAATAGCTTCTGAATGCCTGGTGGACGAGGCCACTGGCTCAGTTGCTGGGAAGCCGATCACACCTGGGCTGCCACCTATTAGTGCCGTCCGGTTGGAACAGATGAGTAAAGCTGTTCGCTGGCTAGTAATTGAACTTCAACAGGGTTCGGGATCTGCAGGCAACTTATCAACTCCGAATCACTCTTCTGCGCCTTTTGATGCTCGGTTTCATGAAGATTCAACTCAATAG 432 50.93 MDSIVDALDNAYQEFVGAVASTLEAKEASGGQVTVATDAALENLKQRWELFRVACDQAEEFLESVKLRIASECLVDEATGSVAGKPITPGLPPISAVRLEQMSKAVRWLVIELQQGSGSAGNLSTPNHSSAPFDARFHEDSTQ 143
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00953 143 MobiDBLite consensus disorder prediction 118 143 - -
Armi1g00953 143 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 32 1 143 IPR033244 GO:0006355(InterPro)|GO:0009631(InterPro)|GO:0010150(InterPro)|GO:0016592(InterPro)|GO:0048364(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00953 K27471 mediator of RNA polymerase II transcription subunit 32
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:25704878 Armi1g04354 Armi-Chr1:186542942 dispersed