AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00955 ATGGACAATCAAAAATCAAACTGGTCAGTTAAGGTGGAAAATCGAAAAGAGGAAGAAGAAGAAGAAGAAGGTGAAGCAGAGGCTGTGATAATTGGGGGTATGGTGTTAGATATACATGCCACTCCTTCTATTCCTCCAAACCCTAGAACTACCGCTCCTGGCAAGGTGTGTTATGCAGCAGGAGGAGTAGCAAGGAACATTGCCGAGTGTGTATCAAAACTTGGAACGAAGCCTTGCATGATAAGTACATTAGGATTGGACATGGCAGGTAATTTGCTGTTGGAGTACTGGAAATCTGCAGGATTATCGATGGAAGGCATTCGAACGGGCCAAGAGATAGACACTCCAGTTGTATGCATTGTCTTTGATACTTATGGAGAACCGACCGCTGCTGTTGCAAGTGTTGAGTCTGTTGAACGGTTTCTTACTCCCAAATGGATTGCACAATTTAAATCGAATATAGCATCTACTCCTATTGTGATGGTTGATGCGAATTTAAGTCTACCAGCTCTTCAAGCATCTTGTGAATTGGCGGCAGAGTTTGGAACCCCTGTGTGGTTTGAGCCTGTATCTGTAGCAAAGTCAAGAAGAATTGTTTCAGTTGCCAAGTATATAACCTTTGCTTCACCGAACGAAGATGAACTGATTGCCATGGCAAACGCTCTCTCTTGCAAAGATGCATTTTCTCCGATCCAAAAGGACAACAGCACAACAGCATCTTTATTTCAACAGCTAAGACCGGCAATCTGGATTTTGCTTGAGAAAGGCATTAAAGTGGTTGTTTTAACCCTTGGATCGAAAGGGGTATTGTTATGTTCTAAAGGGCGCCTCAACTTTCAACGTACTGGGCCAAAGAGAAACAATCGGTCACATGAATTTAGCAAAAAGTTGCATGAAACCATAAATCTACACTGCCCATCGGATCGGTTCTTTAGCGCATTAAGGCTTGAAGGAAGCTCTAGTAGTAGCCCATATGTGGTGCATTTTCCTGCCGTATCATCTGCATCAGTTGTGAGGGTAACTGGAGCTGGCGATTGTCTTGTTGGCGGTGCAATTGCTTCCATATGTGCAGGTCTAGATGTGATGCAAAGTATTGCGGTTGGAATAGCAGCTGCTAAAGCTGCTGTTGAGGCGGAGACCAACGTACCCATCGAGTACAGTTTGGAGCAAATTGCAGAGGATGCAAGATCGGTGTATTTGGGTGCCAACGTTGTTTTTTGTCAGTCACTGTTGTAA 1236 44.01 MDNQKSNWSVKVENRKEEEEEEEGEAEAVIIGGMVLDIHATPSIPPNPRTTAPGKVCYAAGGVARNIAECVSKLGTKPCMISTLGLDMAGNLLLEYWKSAGLSMEGIRTGQEIDTPVVCIVFDTYGEPTAAVASVESVERFLTPKWIAQFKSNIASTPIVMVDANLSLPALQASCELAAEFGTPVWFEPVSVAKSRRIVSVAKYITFASPNEDELIAMANALSCKDAFSPIQKDNSTTASLFQQLRPAIWILLEKGIKVVVLTLGSKGVLLCSKGRLNFQRTGPKRNNRSHEFSKKLHETINLHCPSDRFFSALRLEGSSSSSPYVVHFPAVSSASVVRVTGAGDCLVGGAIASICAGLDVMQSIAVGIAAAKAAVEAETNVPIEYSLEQIAEDARSVYLGANVVFCQSLL 411
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00955 411 MobiDBLite consensus disorder prediction 1 25 - -
Armi1g00955 411 CDD YeiC-kinase-like 29 364 - -
Armi1g00955 411 PRINTS Ribokinase signature 200 215 IPR002139 GO:0016301(InterPro)
Armi1g00955 411 PRINTS Ribokinase signature 30 51 IPR002139 GO:0016301(InterPro)
Armi1g00955 411 PRINTS Ribokinase signature 260 271 IPR002139 GO:0016301(InterPro)
Armi1g00955 411 Gene3D - 23 401 IPR029056 -
Armi1g00955 411 PANTHER ZGC:136858 11 393 - -
Armi1g00955 411 SUPERFAMILY Ribokinase-like 28 378 IPR029056 -
Armi1g00955 411 Pfam pfkB family carbohydrate kinase 28 279 IPR011611 -
Armi1g00955 411 Pfam pfkB family carbohydrate kinase 325 378 IPR011611 -
Armi1g00955 411 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 61 85 IPR002173 GO:0016301(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00955 - -