AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00963 ATGGAGCTTCGATCAATTCAATCGCCAGTCGTTAGTAGTCTAGCTACACAAGGCTTCATTGAAAAGCAGCAACTCATATGCTACCGCCACCTTATCAGATCCTTCCGTACCAAGGGAATTCTTCACTCAAACTCTATCAAGCTTAGACCTCTTCGATTCAAGGCTCAAGCCTCAAGTGCAACAAAAACTGGTTCGCAGCCTGCTGACACGATTTCAAAAGATGGTGAAAAAGACGGAAATCTCATCTTTGTTGCAGGAGCGACAGGCAAAGTTGGTTCGCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAATGTTCGAGCTGGTGTACGAAGTACTCAAAGAGCAGAAACTTTGGTGAAAAGCGTGCAGCAGATGAAACTTGATGGAGCATTATCTGATGGAAGTCAGCCTATAGAGAAGCTTGAACTTGTGGAGTGTGACTTGGAGAAACCAGAGCAGATTAAGCCGGCATTGGGCAAGGCTTCAACAGTTATATGCTGCATTGGGGCCAGCGAGAAGGAGATATTTGATGTTACTGGACCATACCGAATTGATTTTCAAGCCACAAAAAACCTTATTGACGCAGCTACTGCTTCAAAGGCAAAACAGTTTATTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTATTGAATTTGTTCTGGGGAGTCCTATGTTGGAAAAGGAAGGCCGAAGAAGCGCTGCTTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGAGGTATGGAGCGTCCTACGGATTCTTTCAAGGAAACTCATAATCTTACCCTCTATACAGAAGACACTTTATTTGGTGGTTTAGTATCGAATCTTCAGGTGGCAGAACTCCTTGCGTTCATGGCTAAAAACCCTGCTCTCTCTTATTGTAAAGTTGTGGAAGTAATTGCAGAAACAACAGCACCATTGACCCCCATGGGGGATCTCCTATCAAAAATACCACCTCAACGTGCTGTAACTTACCCACCCAAGGAACCAGAAGCTAGCAAAGAACCTGAGCCTGTCCCCAAGAGCACCAGTTCTGAGAGTTCAAGCATTGTCACTGAAACACAATCCCAGTCAAAAACAGTATCGGCAAGGCCACTCTCCCCATATACTGCCTATGAAGGTTTGAAACCTCCTGTATCCCCGATTCCAACCGCACCTGGCAGCAGTAAGGTAGTAGTAGAAGCAGTATCCACTTCTGTAGATTCTGAAACCACCACAACGTCGGAAACCACAGCTATTACAGCTGAACCTGCACCAGTGGCTGTAGGATTGCAAACAACCAGGCCTCTCTCTCCTTATACTGCTTATGAGAGCCTGAAGCCACCTACCTCTCCAACCCCAACCCCAACCCCAAGTGGATCCAAAGAGACACCATCTTATTCCTCTGCTACACCAGAAATTGCATCAGAATCCACTACAAGCATTGATTCGGTTGTGGAGATTGAAAATGGCGGTGATGCCAAAGAGGAGCCTCCTCAGACTTTGACTTCTAGCAATTCACCCTACCCTGTATATGACAATTTGAAACCCCCTACATCGCCATCTCCAAGTTCACCATCGGTATCACCACCATCAACAATCCCTGTAGACAACGGGTCTCCTATTGCTTCCACATTGGAAAACACCTCAGCTAGCACAGTAGTGAAGCCAAGGCCACTTTCACCTTACCCCATGTATGAAAACTTGAAGCCTCCAACTTCTCCTATCCCTTCCACCCCTCAATAA 1749 45.74 MELRSIQSPVVSSLATQGFIEKQQLICYRHLIRSFRTKGILHSNSIKLRPLRFKAQASSATKTGSQPADTISKDGEKDGNLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAETLVKSVQQMKLDGALSDGSQPIEKLELVECDLEKPEQIKPALGKASTVICCIGASEKEIFDVTGPYRIDFQATKNLIDAATASKAKQFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLYTEDTLFGGLVSNLQVAELLAFMAKNPALSYCKVVEVIAETTAPLTPMGDLLSKIPPQRAVTYPPKEPEASKEPEPVPKSTSSESSSIVTETQSQSKTVSARPLSPYTAYEGLKPPVSPIPTAPGSSKVVVEAVSTSVDSETTTTSETTAITAEPAPVAVGLQTTRPLSPYTAYESLKPPTSPTPTPTPSGSKETPSYSSATPEIASESTTSIDSVVEIENGGDAKEEPPQTLTSSNSPYPVYDNLKPPTSPSPSSPSVSPPSTIPVDNGSPIASTLENTSASTVVKPRPLSPYPMYENLKPPTSPIPSTPQ 582
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00963 582 MobiDBLite consensus disorder prediction 461 487 - -
Armi1g00963 582 Gene3D - 80 326 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 399 422 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 565 582 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 346 373 - -
Armi1g00963 582 FunFam Protein TIC 62, chloroplastic 78 328 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 435 449 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 515 531 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 328 582 - -
Armi1g00963 582 Pfam NAD(P)H-binding 86 297 IPR016040 -
Armi1g00963 582 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 325 IPR036291 -
Armi1g00963 582 CDD SDR-a5 82 311 - -
Armi1g00963 582 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 581 IPR044719 -
Armi1g00963 582 MobiDBLite consensus disorder prediction 498 514 - -
Armi1g00963 582 MobiDBLite consensus disorder prediction 532 557 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00963 - -