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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00966 ATGGGTATATGTGCATCAGTTCACTACACAAGAAATCAAGGAAAATTATCAATCAGCAACGGGTCACCATCAACGGCAAAGGTGATCAACTCCGGCGACGGGAGGCTGCAAGAATTCCGGCAACCAATCAGAGCCAGCAACGTCATCTCCGACCACTCAAACGCTTTCTTCCTCTGCAACTGCGAGACCATGTTCGTCAACTGTCACGTGCCTCACGTGGCCGACGACGAAGAGCTACAGCCGGGTCAAATCTACTTCCTGATGCCGAACTCGAAGTCAAACAAACCGCTTTCTTTACAGGAACTGTGTTCGTTGGCCATTAAAGCCAGCTCGGCGCTCGACAAAAGTGCAGAAACGAGGAGGAATGGGGGTACGGTGTCGTTTAGTAGGGGGCGGAAAAGCAATAGGAATGCAAAGGCAAACCACGAGGCTGATTTCCAGCTGGCGTTGAAAAAGCTTGGATGA 465 50.75 MGICASVHYTRNQGKLSISNGSPSTAKVINSGDGRLQEFRQPIRASNVISDHSNAFFLCNCETMFVNCHVPHVADDEELQPGQIYFLMPNSKSNKPLSLQELCSLAIKASSALDKSAETRRNGGTVSFSRGRKSNRNAKANHEADFQLALKKLG 154
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00966 154 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 23 136 - -
Armi1g00966 154 MobiDBLite consensus disorder prediction 114 141 - -
Armi1g00966 154 Pfam PADRE domain 1 139 IPR025322 -
Armi1g00966 154 MobiDBLite consensus disorder prediction 116 134 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00966 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:26041520 Armi18g00286 Armi-Chr18:7788511 wgd