AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00988 ATGGCAACAGCCTCCGCCACCCTATCTCCGGTCACCTTCACGGCCGCACCAGCCACCCGATCCTCCGCCAGAATCACCACCACCAAAGTCACCTACATCAAGGGACTCAACTCATTTGGAGGCCTCAAAGCTCACAACACCGTCGCTTCACTCGGACTCCCTGTTTCCACCGAACAGCAATTTGCAAACTTCGTTTGCTCCTTGAAGAAACCATCATCCAACAACCGCCGTGGCGGTGGCGGTGGCGGAGCACTCACCTCCACCTGCAATGCGGTGGCTGAGATTTTCAGGATAGCTGCAATCATGAATGGACTTACTCTTGTTGGAGTTGCAGTTGGTTTTGTTCTTCTCCGAATCGAAGCAGCTGTTGAAGAAGCAGAGTAA 384 53.39 MATASATLSPVTFTAAPATRSSARITTTKVTYIKGLNSFGGLKAHNTVASLGLPVSTEQQFANFVCSLKKPSSNNRRGGGGGGALTSTCNAVAEIFRIAAIMNGLTLVGVAVGFVLLRIEAAVEEAE 127
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00988 127 SUPERFAMILY PetM subunit of the cytochrome b6f complex 92 124 - -
Armi1g00988 127 Hamap Cytochrome b6-f complex subunit 7 [petM]. 91 123 IPR012595 GO:0009512(InterPro)
Armi1g00988 127 Pfam PetM family of cytochrome b6f complex subunit 7 94 120 IPR012595 GO:0009512(InterPro)
Armi1g00988 127 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 127 IPR053333 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00988 - -