Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g01008	ATGTCCATCTCTTGGGTTCTCTTGCTGAGCCTTCTGTTTTCCGTTGCTTATGTTGCTAATGCAGAAACACATTACCATGAGTTTAAAGTTCAAGAACTAGCGGCAAGGAGGCTATGCCGAAACCATAGAGTAGTAACGGTCAATGGACAGTTCCCGGGACCGACTCTAGAAGTACAAAATGGGGATAGTCTCGTTGTCAAAGTTACGAATGCCTCTCCTTACAATGTCACAATCCATTGGCATGGAGTACGCCAACTGCGAAACCCGTGGGCAGATGGACCAGAATTTGTGACCCAATGTCCGATCCGGCCAGGAGGAAGTTACACATATAGGTTCACCATAACAGACCAGGAGGGAACATTGTGGTGGCATGCTCATAGCCGATGGCTACGATCTACGGTCTACGGTGCACTTGTAATCCGCCCTAAGTCGGGTTCTTTCTACCCCTTCCCAAAACCCAAAATCGAGTTTCCTATTGTTCTAGGCGAATGGTGGGATAGAAAGGTTATCAGTGTTCTACGACAAGCGTTATTCACTGGTGCAGCTCCGAACATTTCAGATGCTCTCACGATTAACGGGCAACCTGGTGATCTTTTCAAATGTTCTACCCAAGGTACTACGAAACTTTCGGTGAACAAAGGCGATACGGTTCTTCTTAGGGTCATCAACGCTGCACTCAATCAACAACTCTTCTTCAGCGTGGCTAACCACAAACTAACCGTAGTCGCGACGGATGCTGTTTACACCAAGCAATTTACAACCAATGTGATCATGGTTGGGCCTGGTCAAACCACGGACGTCCTCCTAACTGCTGATCAACAACCTGGGCGTTACTACATGGCTGCACGAGCCTATGCAAGTGCTAGAAATGTTCCATTTGACAACACCACCACCACAGCTATCTTAGAGTACAAATCCACCACTTCTCAACCAATTTTACCCCAACTTCCGGCCTACAACGACACCAACACGGTCACCGCCTTCTCGAACCAATTAAAAAGTCTCGATAAAGTAACGGTCCCGACTAAAATAGACGAAAACCTGTTTTTCACAGTGGGGTTGGGGTTCTTTAACTGCACCCCTGGACCTAGATGTCAAGGGCCGAATAACACGCGGTTTGGAGCCAGTATGAACAACATCTCATTTGTACTTCCGAACCGGGTATCGTTGCTTCAGGCATATACACAAAAGATACCTAATATCTACACGGTCGACTTTCCGCCTGTGCCACGTGTACAATTCGATTACACGGGGATTGTTCCTCGTGGGCTGTGGCAGCCGGTTAAGGGAACGAAACTTTACAATCTCGAGTTCGGTTCTAACGTGCAGATCGTGCTGCAAGATACGTCGATCTTCTCGACCGAAGATCATCCGGTTCATCTCCATGGTTATCATTTCTATATTGTTGGTCAGGGTTTTGGTAACTTTAATCCTTTAAGAGATCCTGCTAACTTCAATCTTGTGGATCCACCACAAAGGAATACAATTGATGTCCCAGTTGGGGGATGGGCAGCCATCAGATTTGTGGCTGATAATCCAGGAGTTTGGTTGATGCACTGTCACATAGATACTCATCTGGCATGGGGTTTTGCAATGGCTTTCATCGTTGGAAATGGAGTTGGGGAATCTGAAACATTACTACCTCCTCCTCCTGATCTTCCTCGGTGTTAA	1671	46.86	MSISWVLLLSLLFSVAYVANAETHYHEFKVQELAARRLCRNHRVVTVNGQFPGPTLEVQNGDSLVVKVTNASPYNVTIHWHGVRQLRNPWADGPEFVTQCPIRPGGSYTYRFTITDQEGTLWWHAHSRWLRSTVYGALVIRPKSGSFYPFPKPKIEFPIVLGEWWDRKVISVLRQALFTGAAPNISDALTINGQPGDLFKCSTQGTTKLSVNKGDTVLLRVINAALNQQLFFSVANHKLTVVATDAVYTKQFTTNVIMVGPGQTTDVLLTADQQPGRYYMAARAYASARNVPFDNTTTTAILEYKSTTSQPILPQLPAYNDTNTVTAFSNQLKSLDKVTVPTKIDENLFFTVGLGFFNCTPGPRCQGPNNTRFGASMNNISFVLPNRVSLLQAYTQKIPNIYTVDFPPVPRVQFDYTGIVPRGLWQPVKGTKLYNLEFGSNVQIVLQDTSIFSTEDHPVHLHGYHFYIVGQGFGNFNPLRDPANFNLVDPPQRNTIDVPVGGWAAIRFVADNPGVWLMHCHIDTHLAWGFAMAFIVGNGVGESETLLPPPPDLPRC	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g01008	556	Gene3D	-	154	337	IPR008972	-
	Armi1g01008	556	Gene3D	-	364	556	IPR008972	-
	Armi1g01008	556	Pfam	Multicopper oxidase	406	538	IPR011706	GO:0005507(InterPro)\|GO:0016491(InterPro)
	Armi1g01008	556	SUPERFAMILY	Cupredoxins	17	166	IPR008972	-
	Armi1g01008	556	Pfam	Multicopper oxidase	30	144	IPR011707	GO:0005507(InterPro)
	Armi1g01008	556	CDD	CuRO-2-LCC-plant	157	304	IPR034285	-
	Armi1g01008	556	CDD	CuRO-1-LCC-plant	26	142	IPR034288	GO:0005507(InterPro)
	Armi1g01008	556	FunFam	Laccase	12	142	-	-
	Armi1g01008	556	Pfam	Multicopper oxidase	157	306	IPR001117	-
	Armi1g01008	556	CDD	CuRO-3-LCC-plant	401	539	IPR034289	GO:0005507(InterPro)
	Armi1g01008	556	Gene3D	-	11	142	IPR008972	-
	Armi1g01008	556	SUPERFAMILY	Cupredoxins	150	335	IPR008972	-
	Armi1g01008	556	NCBIfam	laccase	21	556	IPR017761	GO:0046274(InterPro)\|GO:0048046(InterPro)\|GO:0052716(InterPro)
	Armi1g01008	556	FunFam	Laccase	154	338	-	-
	Armi1g01008	556	PANTHER	MULTI-COPPER OXIDASE	23	548	IPR045087	GO:0016491(PANTHER)
	Armi1g01008	556	SUPERFAMILY	Cupredoxins	340	556	IPR008972	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g01008	K05909	laccase [EC:1.10.3.2]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr16:60296095	Armi1g01008	Armi-Chr1:27528509	dispersed
	Armi	Armi-Chr16:60328094	Armi1g01008	Armi-Chr1:27528509	dispersed
	Armi	Armi-Chr17:53956045	Armi1g01008	Armi-Chr1:27528509	dispersed
	Armi	Armi-Chr1:27528509	Armi3g02918	Armi-Chr3:114502867	dispersed
	Armi	Armi-Chr1:27528509	Armi2g03400	Armi-Chr2:167512143	wgd