AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g01036 ATGTTGACTAGTGGAGGTGGAGGAACCTTTTACTGGGTTCGAAATGAGGACGAAACAACACCATCTTCATCCAAAATCGAAGGAATCGTTGTAATTTTCGCTTGGGGTTCGCTTCAAGACTGCCACTTGAAGAATTATGTGAATCTTTATTCGTCTCTTGGTTGGAACTCTCTTCTTGTTCTTTCTGATTTTCTCAACCCATTTTTTCCCGAGAAAGCCACCTCACTTGCATTTTCCGTCCTCAATGAGCTTTTAGAGGAGTTGAGGACTAGACCATCCCCTTTAGTCCTGGCTTCCCTTTCTGGTGGTTCACAGGCTTGTATGTATAAGGTTTTTCAGATCATTGAAGGAACATGCGAAGCACATCTCAACTTGGATGATAGTCGATTGATCATGACCTGCATCTCTGGTCAAATGTACGACTCTGGTCCAGTAAATGTTACTGGCGATTTGGGTGCTCGTTTTGCTCTACACTCTTCCGTTCTCAACCTGCCCGGTTCATCAAAGTTGGTATCATTGGTTGCGAAAGGTGTCACGTCTGGTTTGGATGCTCTATTTCTTACTAGATTTGCATCCCAACGCTCCGAGTACTGGCAAACGCTTTACTCCTCTGTTGGTTTGGGGGCCCCATTTCTCATATTATGTTCGGAAAATGATGATCTTGCTCCATATCCGGTTATATGCTCATTTGCTCAACAAGTACAAGGATTAGGAGGACATGTTCGACTTATCGGATGGAAGGACTCTCCGCATGTAGGTCACTACAAGCACAATCCCATCCAGTACAGAGCAGCTGTGACGGAGTTTCTTGAGCACTCTGTTTTGATATTTAACCAAAAACTAGAAAAACTTGGTGAAAGATGTGGCATGGGGGGTATGCACGATAAGATATACGAACTAATTTGCGACCTCCAGAATGCAGCAGTGGACTCAAATCAGAGCCTTAGAAGAGTAGCGGTGGGACCAAACGACCACTTCTTCCTGCCAAGTTCTGAAACTGGTAAAGAATCTGTATCCTTACAAGATGAGCAGAAAGAAAGACGAGGTGTCCATTTGGCAGGTCCTCCTCCTCCTCCGACCCTTAACCCTCACGGTGTTCTTGGCCAAGTCCTGTTTGATGTGTGTGTGCCCAAGAACATCGAAGGTTGGGATATTAAGTTCGATAAGAGGCAACCATTTGCATCTGCTCGTAAGCGATCATCTCTAAATGCATTAAAGCGCATGCGACGCTCAAGATTATGA 1242 44.85 MLTSGGGGTFYWVRNEDETTPSSSKIEGIVVIFAWGSLQDCHLKNYVNLYSSLGWNSLLVLSDFLNPFFPEKATSLAFSVLNELLEELRTRPSPLVLASLSGGSQACMYKVFQIIEGTCEAHLNLDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSVLNLPGSSKLVSLVAKGVTSGLDALFLTRFASQRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFAQQVQGLGGHVRLIGWKDSPHVGHYKHNPIQYRAAVTEFLEHSVLIFNQKLEKLGERCGMGGMHDKIYELICDLQNAAVDSNQSLRRVAVGPNDHFFLPSSETGKESVSLQDEQKERRGVHLAGPPPPPTLNPHGVLGQVLFDVCVPKNIEGWDIKFDKRQPFASARKRSSLNALKRMRRSRL 413
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g01036 413 Gene3D alpha-beta hydrolase 152 274 IPR029058 -
Armi1g01036 413 Pfam Eukaryotic protein of unknown function (DUF829) 135 383 IPR008547 -
Armi1g01036 413 PANTHER UNCHARACTERIZED 7 273 IPR008547 -
Armi1g01036 413 MobiDBLite consensus disorder prediction 328 363 - -
Armi1g01036 413 SUPERFAMILY alpha-beta-Hydrolases 21 272 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g01036 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr14:57323740 Armi1g01036 Armi-Chr1:28430193 dispersed
Armi Armi-Chr1:28430193 Armi12g00633 Armi-Chr12:14074745 wgd