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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g01048 ATGGCGGAATCGAAACAAACTCCGCATCTTCTGTTCAAACAACGCTCCTGGTCACCTGACATCCACCGCGACAAAGAATGGCAGAAGCTCAAGCTCAAACAGTTACGTCGTTACCGCCACCGCCGCAGCAAGAGCATTGATGCCGACGTTGATGATGTCACTGATGATGATGTAAAAGAGCTTAAAGCGTGTTTTGATCTAGGTTTCGGTTTCGATCCGTCTAACGATTTGGATCCGAAGCTTGCGCAAGCTTTTCCTGCTCTCGAGTTGTACGCGGCCGTTAATCGGCAGTACAATAATAGACTCCTCTCAAGGTCTTCTTCATCCCTAAGTTCAGATTCTTCTTCAAGTTCATCAAGTCTTACCACCGCCATTATTGATCCAAGTGATGATCCGCAAAAGGTAAAAACGAAATTGAAACATTGGGCGCAAGTGGTTTCTTGTTCGATTCTGGATGCTTCTTCGCAATCAATAACAAAAATTGCAGAATAG 492 45.12 MAESKQTPHLLFKQRSWSPDIHRDKEWQKLKLKQLRRYRHRRSKSIDADVDDVTDDDVKELKACFDLGFGFDPSNDLDPKLAQAFPALELYAAVNRQYNNRLLSRSSSSLSSDSSSSSSSLTTAIIDPSDDPQKVKTKLKHWAQVVSCSILDASSQSITKIAE 163
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g01048 163 Pfam Protein of unknown function (DUF1685) 53 111 IPR012881 -
Armi1g01048 163 MobiDBLite consensus disorder prediction 106 127 - -
Armi1g01048 163 PANTHER OSJNBA0071G03.3 PROTEIN 9 151 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g01048 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20359 Armi1g01048 Armi8g02058
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr13:12070368 Armi1g01048 Armi-Chr1:28812943 dispersed
Armi Armi-Chr1:28812943 Armi4g02812 Armi-Chr4:111176301 dispersed
Armi Armi-Chr1:28812943 Armi18g00340 Armi-Chr18:8943593 wgd
Armi Armi-Chr1:28812943 Armi8g02058 Armi-Chr8:82515150 wgd