AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi3g04253 ATGGCTCTTTTGGAATCAAAAAAAGATAGGGGGGAGGTGAGGATTCATGAAAGTTTGGATGAACTCAGCACAGATTTGGCTGATTATATAGCTGAATTATCAGAGGCATCAGTTAAAGAGCGTGGTGTTTTTGCCATTGCTTTATCCGGAGGTTCTCTTATTGGCTTAATGAGGAATCTTTGTGGAGCTCCTTATAACAAGACTGTGGATTGGTCCAAATGGTATATATTTTGGGCAGATGAACGTGTTGTGGCCAAGAATCATGTGGACAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCCAAGTTACCAATTGTTCCGAGCCATGTACATTCCATCAACGATTCCCTGACTGCGGAAGAAGCTGCGAATGAATACGAGTTTGTGATCAGACAGCTCGTCAGAACCCGTGTGGTCAACGTGTCTGACGTCAGCGACTGCCCGAAGTTTGATCTAATCCTTCTAGGGATGGGCCCAGACGGCCACGTGGCATCCCTGTTCCCTAACCACTCGGTTCTTGAAGAAAAGAACGAGTGGGTGACGTTCATCACGACGTCCCCGAAGCCTCCGCCGGAAAGAATCACGTTCACGCTGCCGGTTATCAACTGTGCGGCCAATGTGGCGGTTGTGGTGACGGGTGGCGGAAAAGCGGAGGCTGCCCGGCTGGCGATAGACGATGACGTGGGACCGGAGGGTCTCGTGTTGCCAGCTAGGATGATCCAGCCAGCTGTAGGGAAACTGGTGTGGTTTTTGGATAATCAGGCTGGTTCAAAGCTGAAGAGCTTTTCTCAAATTTCTAAGTAG 807 48.7 MALLESKKDRGEVRIHESLDELSTDLADYIAELSEASVKERGVFAIALSGGSLIGLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINCAANVAVVVTGGGKAEAARLAIDDDVGPEGLVLPARMIQPAVGKLVWFLDNQAGSKLKSFSQISK 268
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi3g04253 268 SUPERFAMILY NagB-RpiA-CoA transferase-like 13 261 IPR037171 -
Armi3g04253 268 FunFam Probable 6-phosphogluconolactonase 8 261 - -
Armi3g04253 268 PANTHER 6-PHOSPHOGLUCONOLACTONASE 5 262 IPR039104 -
Armi3g04253 268 Pfam Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase 19 250 IPR006148 GO:0005975(InterPro)
Armi3g04253 268 CDD 6PGL 20 252 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
Armi3g04253 268 Gene3D - 9 263 - -
Armi3g04253 268 Coils Coil 19 39 - -
Armi3g04253 268 NCBIfam 6-phosphogluconolactonase 15 260 IPR005900 GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi3g04253 K01057 6-phosphogluconolactonase [EC:3.1.1.31]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
384212 Armi Armi3g04253 Armi-Chr3:154814955 Armi8g00254 Armi-Chr8:4863660