Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi3g04253 | ATGGCTCTTTTGGAATCAAAAAAAGATAGGGGGGAGGTGAGGATTCATGAAAGTTTGGATGAACTCAGCACAGATTTGGCTGATTATATAGCTGAATTATCAGAGGCATCAGTTAAAGAGCGTGGTGTTTTTGCCATTGCTTTATCCGGAGGTTCTCTTATTGGCTTAATGAGGAATCTTTGTGGAGCTCCTTATAACAAGACTGTGGATTGGTCCAAATGGTATATATTTTGGGCAGATGAACGTGTTGTGGCCAAGAATCATGTGGACAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCCAAGTTACCAATTGTTCCGAGCCATGTACATTCCATCAACGATTCCCTGACTGCGGAAGAAGCTGCGAATGAATACGAGTTTGTGATCAGACAGCTCGTCAGAACCCGTGTGGTCAACGTGTCTGACGTCAGCGACTGCCCGAAGTTTGATCTAATCCTTCTAGGGATGGGCCCAGACGGCCACGTGGCATCCCTGTTCCCTAACCACTCGGTTCTTGAAGAAAAGAACGAGTGGGTGACGTTCATCACGACGTCCCCGAAGCCTCCGCCGGAAAGAATCACGTTCACGCTGCCGGTTATCAACTGTGCGGCCAATGTGGCGGTTGTGGTGACGGGTGGCGGAAAAGCGGAGGCTGCCCGGCTGGCGATAGACGATGACGTGGGACCGGAGGGTCTCGTGTTGCCAGCTAGGATGATCCAGCCAGCTGTAGGGAAACTGGTGTGGTTTTTGGATAATCAGGCTGGTTCAAAGCTGAAGAGCTTTTCTCAAATTTCTAAGTAG | 807 | 48.7 | MALLESKKDRGEVRIHESLDELSTDLADYIAELSEASVKERGVFAIALSGGSLIGLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINCAANVAVVVTGGGKAEAARLAIDDDVGPEGLVLPARMIQPAVGKLVWFLDNQAGSKLKSFSQISK | 268 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi3g04253 | 268 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 13 | 261 | IPR037171 | - | |
| Armi3g04253 | 268 | FunFam | Probable 6-phosphogluconolactonase | 8 | 261 | - | - | |
| Armi3g04253 | 268 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 5 | 262 | IPR039104 | - | |
| Armi3g04253 | 268 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 19 | 250 | IPR006148 | GO:0005975(InterPro) | |
| Armi3g04253 | 268 | CDD | 6PGL | 20 | 252 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Armi3g04253 | 268 | Gene3D | - | 9 | 263 | - | - | |
| Armi3g04253 | 268 | Coils | Coil | 19 | 39 | - | - | |
| Armi3g04253 | 268 | NCBIfam | 6-phosphogluconolactonase | 15 | 260 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi3g04253 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 384212 | Armi | Armi3g04253 | Armi-Chr3:154814955 | Armi8g00254 | Armi-Chr8:4863660 |