Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi3g04257	ATGGAAGAGTCACGTGATCCATTTCTTCAGTCTAATGTTGTCGAGCCTGCTAATGGTTATAGCTCAAGATTCAACCCCGATAAGTGTGGGCTCCAGAACTTCATTGGGCCTGGTTTTCCAGGGTTGAAGAAGCGAGGGCATACTCTTGGAAACCGATCTTGGATAAAAATTGAGCAAAGTGGGAACTCGAAAGTTGTGGAGCTAGACAAGGCAACTGTAATGAGGCATTGTTCTTTGCCGGCTAGAGATCTTCGTCTTTTGGATCCTCTTTTTATTTATCCATCCACGATATTAGGCCGTGAGAAAGCTATTGTGGTTAGTCTTGAGCAGATTAGATGTATAATCACAGCGGATGAGGTATTCCTTATGAATTCACTGGACGGATCTGTAGTTCAGTACAAATCCGAATTGTGCAAACGCCTTCAGAAAGAGAAATATAACTCAGATGATCTACCATTTGAGTTTAGGGCGTTGGAACTTGCATTGGAGTTTACGTGCCTCACTCTTGATACTCAGGTGAAAGAGTTGGAAATGGAAATTCATCCAGTACTTGATGAACTAGCAAAATCAATAAGTACTCTCAATCTTGAACGTGTTCGAAGATTCAAAGGCCACCTTCTGGCATTGACTCAACGGGTGCAAAAGGTCTGTGATGAAATAGAACATCTAATGAATGATGATGGAGATATGGCTGAGATGTACCTAACTGAGAAGAAACAAAGGAACTTGTGTAATGATCTATATGATCAAGTACAAGGAAATATTTTTATCGGGCCTGGAGTGGGATTAGGATCAAAATCCGCTCCTGTTTCCCCTGTCGGGTCTGCGAGTGGGTCACATAAATTGCAAAGGGCATTTAGTAATATAAGTGCACACAGACATGGAAGCTTGTTGAGTTCTTCTGCAACTGCTGAAACTGAAAACATTGATCAACTTGAGATGTTGCTGGAAGCATATTTCGTTGGAATTGACAACACTCTAAACAAGCTGCTTTCGCTCAAGGAATACATCGATGACACCGAAGATCTGATCAACATTAAACTTGGAAATATTCAGAATCAGCTGATTAAGTTCGAGCTGCTTTTGACAGCCGCTACCTTTTTGGCTACTGTTTTTGCTGTCGTCACAGCGGTATTCGGAATGAACTTTGAAGACGACGTTTTTGACGAGCCAAACAGATTCCAGTGGGTCGTTTCTGTCAGCGTGACCTTATGTGGAGTCTTGTATATATGTTTCTTGCTTTATTTTAAATATAAGAAAATTTTCCCTCTGTAG	1275	41.25	MEESRDPFLQSNVVEPANGYSSRFNPDKCGLQNFIGPGFPGLKKRGHTLGNRSWIKIEQSGNSKVVELDKATVMRHCSLPARDLRLLDPLFIYPSTILGREKAIVVSLEQIRCIITADEVFLMNSLDGSVVQYKSELCKRLQKEKYNSDDLPFEFRALELALEFTCLTLDTQVKELEMEIHPVLDELAKSISTLNLERVRRFKGHLLALTQRVQKVCDEIEHLMNDDGDMAEMYLTEKKQRNLCNDLYDQVQGNIFIGPGVGLGSKSAPVSPVGSASGSHKLQRAFSNISAHRHGSLLSSSATAETENIDQLEMLLEAYFVGIDNTLNKLLSLKEYIDDTEDLINIKLGNIQNQLIKFELLLTAATFLATVFAVVTAVFGMNFEDDVFDEPNRFQWVVSVSVTLCGVLYICFLLYFKYKKIFPL	424

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi3g04257	424	CDD	Mrs2-Mfm1p-like	54	421	IPR039204	-
	Armi3g04257	424	Gene3D	Magnesium transport protein CorA, transmembrane region	362	420	-	-
	Armi3g04257	424	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	39	421	IPR039204	GO:0015095(PANTHER)\|GO:0015693(PANTHER)
	Armi3g04257	424	Pfam	Magnesium transporter MRS2-like	61	242	-	-
	Armi3g04257	424	Gene3D	Magnesium transport protein CorA, transmembrane region	128	355	-	-
	Armi3g04257	424	FunFam	Magnesium transporter MRS2-1	41	125	-	-
	Armi3g04257	424	Gene3D	-	44	125	-	-
	Armi3g04257	424	SUPERFAMILY	Magnesium transport protein CorA, transmembrane region	361	413	IPR045863	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi3g04257	K16075	magnesium transporter

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	367583	Armi	Armi14g01437	Armi-Chr14:73148969	Armi3g04257	Armi-Chr3:155012435
	377901	Armi	Armi2g00422	Armi-Chr2:8477899	Armi3g04257	Armi-Chr3:155012435
	384216	Armi	Armi3g04257	Armi-Chr3:155012435	Armi6g02594	Armi-Chr6:90645400
	405897	Armi	Armi3g04257	Armi-Chr3:155012435	Armi12g00246	Armi-Chr12:4181788

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Armi1g01696	.	1	436	MRS2 gene family	AT3G58970	65.31	0.0	563.0
	Armi2g00422	ACH	1	442	MRS2 gene family	AT1G16010	77.629	0.0	674.0
	Armi3g04257	.	1	421	MRS2 gene family	AT2G03620	65.127	2.32e-179	505.0
	Armi4g03256	.	1	459	MRS2 gene family	AT5G22830	64.807	0.0	532.0
	Armi6g00443	.	123	459	MRS2 gene family	AT5G22830	76.627	1.02e-174	496.0
	Armi6g02594	.	6	386	MRS2 gene family	AT5G09690	73.228	0.0	549.0
	Armi7g00696	ACH	47	484	MRS2 gene family	AT3G19640	67.77	0.0	571.0
	Armi8g01889	ACH	47	484	MRS2 gene family	AT3G19640	63.478	0.0	548.0
	Armi12g00246	ACH	1	442	MRS2 gene family	AT1G16010	84.564	0.0	741.0
	Armi14g01437	ACH	1	443	MRS2 gene family	AT1G80900	77.803	0.0	700.0
	Armi16g01612	.	1	386	MRS2 gene family	AT5G09690	66.919	1.22e-178	500.0