AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi3g04258 ATGGACTTCTGGGTGGTTGCAGCCGCTACCGGTGCCGGTTATGTTGCCAAGCACTGGCAGAATTTATCAGGTGAGAAAGATGGCTCACCGAACCCGACACCTATGCCATCACCACGACTGCAACCGGACGCATGCCGAGTGTTCAGCAAAATCCCCAACTCGGTTTTCCCACAGCCAGTTTCCGGTCCAGCTCCGATCTTTATCGAGAAACAAGTTTTTCAAGATGATACCGATGAAATCAACGGAAAACACGACTACTTTGACACTTCAGGCCATCGTTTATATGAATACAGAACCAATAACACAAATGGAAAATCGTTCTTGAGTCTGAGACCCTTAGTGGTAACCAGTAACGGCAGAGATTCTGGACGAAAACAAACGACACAACTTGATGATATGAAAGACCGTAAGATCGTGTTCATGAATGAAATTGGATCATCCGTGGAAGCATCATTCCTTGAACCAGATGGATCAACAAAGCTTCCAAGAAGACCAAAACAAATGTATGTCAAGAGATTTGAAACAGGCAACGATATCGTGCCCTTGTTCCTCGGGATCACAATCGGGATTTTGTCGACTACTGTGAGTAATCAACATGAAGTCAAGCATCTAAACGAGTTGCTAGAAGAAGCTGAAAGTATGGTTCGAGATTTACACAACAAACTTGAAACGAAAGACGGGATTTCCACAAAGGAGCACGGCACCGAGGCAAATAAAACTGCAACCGATAGTCCAAAAGCCGACAACTTTGAGTTAACAAGCGACATCGAGGCAGAGCTTGAGGCCGAGCTTGTGAGATTAGAACAAAATATGACTAACGCTGTGGAGGTTGATTCAGACATTGAAGCAGACATGGCTAGAGGAGACTTTAACCTAGATGCAGTCACCTGGCAACTTGATAGCCGATCTGAATCGGACAACAGTGACAAAAGTGAAAGCACCGGCAGACCCGATTTCACTCCAAACTACGCAGTTTCGCCACTGGACTTACGGCTACGCCTTCATGAAGTAATCGAGTCAGAACTCCGAGCCCGTATCGAGGAGCTCGAGGCCGTTCTCGAGAACCAAAACAGCCAACGTAAGCCTCCTTCACCAGACCCACAAGAAGAAAACTCTTTCTGGGACTTCGATCACACCAGAATCGAATCTTCTTCATCAACCCCTTAA 1167 46.19 MDFWVVAAATGAGYVAKHWQNLSGEKDGSPNPTPMPSPRLQPDACRVFSKIPNSVFPQPVSGPAPIFIEKQVFQDDTDEINGKHDYFDTSGHRLYEYRTNNTNGKSFLSLRPLVVTSNGRDSGRKQTTQLDDMKDRKIVFMNEIGSSVEASFLEPDGSTKLPRRPKQMYVKRFETGNDIVPLFLGITIGILSTTVSNQHEVKHLNELLEEAESMVRDLHNKLETKDGISTKEHGTEANKTATDSPKADNFELTSDIEAELEAELVRLEQNMTNAVEVDSDIEADMARGDFNLDAVTWQLDSRSESDNSDKSESTGRPDFTPNYAVSPLDLRLRLHEVIESELRARIEELEAVLENQNSQRKPPSPDPQEENSFWDFDHTRIESSSSTP 388
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi3g04258 388 MobiDBLite consensus disorder prediction 222 247 - -
Armi3g04258 388 Coils Coil 250 277 - -
Armi3g04258 388 PANTHER EMB|CAB62613.1 1 358 IPR040348 GO:0008356(InterPro)
Armi3g04258 388 MobiDBLite consensus disorder prediction 222 239 - -
Armi3g04258 388 MobiDBLite consensus disorder prediction 354 388 - -
Armi3g04258 388 Coils Coil 339 359 - -
Armi3g04258 388 MobiDBLite consensus disorder prediction 300 324 - -
Armi3g04258 388 Coils Coil 201 224 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi3g04258 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr2:29411286 Armi3g04258 Armi-Chr3:155016561 dispersed