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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr1g07644 ATGCTCCTTTACCGCCCAATGTTCAACTTGCCTCGATCTTCGATTAAGGCATATTTGAACGACTGGGATGGTAGAGGTTGGGCACTTCTGGCAGGTTTTTTGTGTGGTTTTGGGAATGGTCTCCAGTTTATGGGTGGACAAGCTGCTGGTTATGCGGCAGCTGATGCAGTTCAGGCACTTCCTTTTGGGGTGTGCTCCTTTTTGGTGAATACCGCAAATCTTCCAAGAGAACATATGCACTTCTCGCCGGCATGTTATCCATGTTTATTGTGGCGGTTGGAGTTCTAA 288 47.57 MLLYRPMFNLPRSSIKAYLNDWDGRGWALLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPFGVCSFLVNTANLPREHMHFSPACYPCLLWRLEF* 96
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr1g07644 95 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 2 62 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0071705(InterPro)
Artr1g07644 95 Pfam Ureide permease 1 62 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr1g07644 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr1:223584735 Artr1g07644 Artr-Chr1:223635066 proximal
Artr Artr-Chr1:223635066 Artr1g07645 Artr-Chr1:223638261 tandem