Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Artr1g07673	ATGGATTACTCTCCGGCGACTCGCCGGACAATCAAAAAACCAACACCAGACCTCTATTCAACGTTCGTAGTTCACAGCGATGAAGAAGACAATCAAAACGACGACGAATCACTCCCTCCACTTCTCAAACGCTTACCTAAAGACTTCGGCGCCGCCGTTGATTCCGATGACGACGAAAGCATATCCGGTACAATGATCGTGAAGCGCGTGGAGTCCACGCGCCATCCCACGTGCCGTGGGAGAGATGACGAGTCCGATGACGATGAAAATGAGAGCATCTCCGGTACTATGATTGTGAAGACTAACCCTAGGCGCGTGGATTACACGCGCCGGAGAGATGAGGATGAGGAGGATGACGACGATGAGGAAGGAGGTGGATTTGGTACGTTTGTGGTGAGATCGGATGAGAGAGAGGATGAGTCGGTATCGGGGACGTTTGTGAGGCGGAGTGTAGGTGGAGGAATGTCGACGATGAGTAGAGCGGTAGCGAGTATGCAGGGAGTAGTAGGGGAGGGGTTTGGGAAAGGGAGGGGGAAAACGTCGTCTTCGCAGGATGGTGACGGAGGGCATTCGAGGAAACGGACGAGTAAAATGTCGTCCGGTTCCATTGCGGATAGTATTACGAGAGAAGATCCGTCTACTAAGTATGAATTGCTTCATGAACTTGGAAAAGGTTCTTATGGGTCCGTCTACAAAGCTCGTGATTTAAAAACTTCGGAAATGGTCGCAATTAAAGTGATATCATTATCTGAAGGGGAAGAAGGGTATGAAGAAATTCGTGGTGAAATAGAGATGTTGCAGCAATGCAGTCATCCTAATGTTGTTCGTTATCTAGGAAGCTACCAGGGTGAGGAGTACCTCTGGATTGTAATGGAGTATTGTGGCGGAGGAAGTGTTGCTGATTTGATGAATGTTACAGATGAACCTCTAGAGGAGTACCAAATAGCATATATATGTAAGGAAGCATTGAAGGGCTTATCCTATTTGCACTCGATCTTCAAGGTGCATCGTGATATCAAGGGTGGTAATATATTGTTGACTGAACAAGGAGAGGTGAAGTTGGGTGATTTTGGTGTTGCTGCACAGCTGACAAGGACGATGTCCAAACGTAATACGTTTATTGGTACTCCCCACTGGATGGCTCCTGAAGTTATCCAGGAGAGCCGATATGATGGGAAGGTGGATGTGTGGGCTCTTGGGGTGTCTGCAATCGAAATGGCAGAGGGCCTTCCTCCAAGATCAAATGTGCATCCAATGAGGGTGTTATTTATGATCTCCATCGAACCAGCTCCAATGCTTGAAGATAAAGAAAAATGGTCTCTTGTGTTCCATGATTTCATTGCAAAATGCCTTACAAAAGACCCTCGTATACGCCCCACTGCATCTGAGCTACTAAAGCATAAATTCATAGAAAAATGCAAAAGTGGAGCTTCTGCAATGGTGCCAAAGCTCGAGAAGGCAAAGATAAATAGGGCTGCAATGGCATTGGAAGCAGAACACGTTTCTGAGACCATACCAGGATATGGGACACTTGGACCGAGAGTGAATGAAGACTTTGGAGATACTGTCCCTTCTAAACCTCAACAAGTGCCCAATGGAGTACCTGCTGTAGGTGGTACAGTAAAAGCCGGTGGTTTGGAAGAGGCTGAAGAAGGTGATTTTGGAAGTGTTATAATTCATGGTGGAGTGGATATACATAAGACAGCTGCTAAAACACCGCTTCCAGCAGCAAAGGACGCCTCACACTCTTCAGCACGTGGTCAAAGTTTATCAATGGCTGATCCTGGGGAAGATTCAGTTAGTCCCTGGTTGACCAAAAAGGTTGGGGGATCTGCAGATACATTTCGTGCTGTTGAATCACCATCTACTGAACACACAACACAAGCTATTGGAAGCAACGGTGCTGTCGTCAGTGGCACAACCAAGAATGAAGGTGTTAATCGCAAAGCACTAGACAAGCTTTGGTCCATATATGCCGCTGGTAACACAGTGCCCATTCCGTTTTTGAGGGCAACTGATATCTCTCCCATTGCATTGTTGTCTGAGAATGTGCTTGGAAGTCAGCATCTAGATAATGTTGGCAACGTTGCTGTAGAAGCATTACAAGAGCTTTTCACAAGTGATGGGCAATCTAAAAAGAGTCGAAGACAAAACGAGCTGCCTCTTCCACCGAGTGTTTATCAGAGACTTACTTCGAGTCCAACATTGATGAATCTTGCGCAGGCTTTATCATATCATAAAATGTGCTACGAAGAGATGCCACTGCAAGAACTACAAGCGACACAGGAACAACAAACCATTCAGAACCTCTGTGACACCCTTAGAACTATTTTGCGGTTATAG	2343	46.35	MDYSPATRRTIKKPTPDLYSTFVVHSDEEDNQNDDESLPPLLKRLPKDFGAAVDSDDDESISGTMIVKRVESTRHPTCRGRDDESDDDENESISGTMIVKTNPRRVDYTRRRDEDEEDDDDEEGGGFGTFVVRSDEREDESVSGTFVRRSVGGGMSTMSRAVASMQGVVGEGFGKGRGKTSSSQDGDGGHSRKRTSKMSSGSIADSITREDPSTKYELLHELGKGSYGSVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLEEYQIAYICKEALKGLSYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSNVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKCLTKDPRIRPTASELLKHKFIEKCKSGASAMVPKLEKAKINRAAMALEAEHVSETIPGYGTLGPRVNEDFGDTVPSKPQQVPNGVPAVGGTVKAGGLEEAEEGDFGSVIIHGGVDIHKTAAKTPLPAAKDASHSSARGQSLSMADPGEDSVSPWLTKKVGGSADTFRAVESPSTEHTTQAIGSNGAVVSGTTKNEGVNRKALDKLWSIYAAGNTVPIPFLRATDISPIALLSENVLGSQHLDNVGNVAVEALQELFTSDGQSKKSRRQNELPLPPSVYQRLTSSPTLMNLAQALSYHKMCYEEMPLQELQATQEQQTIQNLCDTLRTILRL*	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Artr1g07673	780	Pfam	Protein kinase domain	216	470	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Artr1g07673	780	ProSiteProfiles	Protein kinase domain profile.	216	470	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Artr1g07673	780	MobiDBLite	consensus disorder prediction	573	602	-	-
	Artr1g07673	780	PANTHER	SERINE-THREONINE-PROTEIN KINASE TAO	191	503	IPR050285	GO:0006468(PANTHER)\|GO:0035556(PANTHER)\|GO:0043408(PANTHER)
	Artr1g07673	780	SMART	serkin-6	216	470	IPR000719	GO:0004672(InterPro)\|GO:0005524(InterPro)\|GO:0006468(InterPro)
	Artr1g07673	780	FunFam	serine-threonine-protein kinase dst1 isoform X1	213	504	-	-
	Artr1g07673	780	MobiDBLite	consensus disorder prediction	170	210	-	-
	Artr1g07673	780	CDD	STKc-MAP4K3-like	215	470	-	-
	Artr1g07673	780	ProSitePatterns	Protein kinases ATP-binding region signature.	222	245	IPR017441	GO:0005524(InterPro)
	Artr1g07673	780	MobiDBLite	consensus disorder prediction	23	42	-	-
	Artr1g07673	780	FunFam	Aurora kinase A	208	297	-	-
	Artr1g07673	780	MobiDBLite	consensus disorder prediction	50	143	-	-
	Artr1g07673	780	Gene3D	Transferase(Phosphotransferase) domain 1	212	504	-	-
	Artr1g07673	780	SUPERFAMILY	Protein kinase-like (PK-like)	215	471	IPR011009	-
	Artr1g07673	780	MobiDBLite	consensus disorder prediction	195	209	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Artr1g07673	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	475489	Artr	Artr1g07673	Artr-Chr1:224231820	Artr2g04331	Artr-Chr2:136651622
	583740	Artr	Artr1g07673	Artr-Chr1:224231820	Artr9g00450	Artr-Chr9:16790370

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Artr1g02607	.	1	41	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G53165	58.537	3.45e-10	53.9
	Artr1g07673	.	1	836	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G69220	59.281	0.0	896.0
	Artr2g04331	.	1	690	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	62.411	0.0	833.0
	Artr2g09416	.	400	429	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	76.667	1.06e-08	49.3
	Artr3g11334	.	414	690	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	43.986	2.13e-53	182.0
	Artr4g00661	.	415	476	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G14480	35.616	2.10e-07	47.0
	Artr4g10331	ACH	63	262	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G53165	25.114	9.30e-08	53.5
	Artr5g09942	ACH	63	262	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G53165	25.571	6.12e-08	54.3
	Artr6g02619	.	1	34	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	64.706	2.44e-08	50.8
	Artr7g00221	.	344	690	MAP Kinase Kinase Kinase Kinase Protein gene family	AT3G15220	44.199	8.02e-78	251.0
	Artr8g08232	.	5	677	MAP Kinase Kinase Kinase Kinase Protein gene family	AT1G79640	53.458	0.0	681.0
	Artr9g00231	.	7	476	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G14480	50.607	6.98e-157	454.0
	Artr9g04389	.	6	672	MAP Kinase Kinase Kinase Kinase Protein gene family	AT5G14720	61.662	0.0	835.0
	Artr9g08662	.	40	709	MAP Kinase Kinase Kinase Kinase Protein gene family	AT4G10730	64.507	0.0	914.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Artr	Pkinase	1.3e-69	CL0016		PK	STE_STE20-Pl