Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr1g07686 | ATGGCACTTTTGGAGTTAAAAAAGGACAGAGGTGAGGTGAGGATTCATGAGAGTTTGGAAGAACTTAGCACCGATTTAGCGGATTATATAGCGGAATTATCTGAAGCATCGGTTAAAGAACGAGGTTTTTTCGCCATTGCTTTATCGGGTGGTTCACTTATTAGCTTGATGAGGAATTTGTGTGGAGCGCCTTATAACAAGACTGTAGATTGGTCTAAATGGTATATATTTTGGGCGGATGAACGTGTTGTTGCGAAGAATCATGTTGATAGTAACTATAAGCTTGCTAAAGATCATCTGTTGTCCAAGTTTCCTATTGTTCCAAGCCATGTGCATTCCATCAATGATTCAATCACAGCAGAAGAAGCTGCAAATGAGTACGAGTTTGTGATCAGACAGTTAGTCAGAACCCGTGTGGTTAATGTTTCTGATGTCAGCGACTGCCCGAAATTTGATCTAATCCTACTAGGGATGGGGCCAGATGGTCACGTGGCATCTTTGTTCCCTAACCATTCGGTTCTTGAAGAAAAGAATGAATGGGTGACATTCATCACCACATCCCCTAAACCACCACCCGAAAGAATCACATTCACATTGCCTGTTATCAACTCTGCAGCCAATGTGGCAGTGGTCGTGACAGGTATAGAAAAAGCGGAAGCTGCCCGTCTGGTGATAGATGACGTGGGACCTGAGTGCCCGGTTTTGCCAGCTAGGATGATTGAGCCAGCTGTAGGGAAACTGGTGTGGTTTTTGGATAACCAAGCTGGTTCAAAGCTCAAGTGCTTTTCTCAATTTTCTAAGTAG | 804 | 43.66 | MALLELKKDRGEVRIHESLEELSTDLADYIAELSEASVKERGFFAIALSGGSLISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKFPIVPSHVHSINDSITAEEAANEYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGIEKAEAARLVIDDVGPECPVLPARMIEPAVGKLVWFLDNQAGSKLKCFSQFSK* | 268 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr1g07686 | 267 | CDD | 6PGL | 20 | 251 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Artr1g07686 | 267 | Gene3D | - | 9 | 262 | - | - | |
| Artr1g07686 | 267 | NCBIfam | 6-phosphogluconolactonase | 15 | 259 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Artr1g07686 | 267 | FunFam | Probable 6-phosphogluconolactonase | 8 | 260 | - | - | |
| Artr1g07686 | 267 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 19 | 249 | IPR006148 | GO:0005975(InterPro) | |
| Artr1g07686 | 267 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 7 | 260 | IPR039104 | - | |
| Artr1g07686 | 267 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 13 | 261 | IPR037171 | - | |
| Artr1g07686 | 267 | Coils | Coil | 19 | 39 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr1g07686 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 475501 | Artr | Artr1g07686 | Artr-Chr1:224577116 | Artr4g01929 | Artr-Chr4:60203356 | |
| 583747 | Artr | Artr1g07686 | Artr-Chr1:224577116 | Artr7g11147 | Artr-Chr7:375911925 |