AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr1g07693 | ATGCCAACATTAACAAAGCTGTATACGATGAAAGAAGCATCAGAACATAATTCTGCTGGTGATTGTTGGGTTGTTATTGACGGCAAGGTGTATGATGTGTCATCGTATCTGGACGACCATCCAGGTGGAGATGATGTCCTCCTTCAGGCTACTGGGAAAGACGCTACAGAAGAATTTGAAGACGCAGGTCATAGCAAAACCGCTAGGGAACAAATGGAGACTTTTTGTGTGGGTGAGTTGGACCCATCAGACATCCCACAACTTGAGGTTGTTGCAGAGAAACAAAAGAATTACGTCCCTGGGAAGCTTGTTCACTTGAGTAAGCAATACTGGGCTGTTCCTGTGGCAGCTGTTGGCATATCTGTGGTGGTCACCGTGTTGTACTTGCGCAAGAAGTAG | 399 | 46.12 | MPTLTKLYTMKEASEHNSAGDCWVVIDGKVYDVSSYLDDHPGGDDVLLQATGKDATEEFEDAGHSKTAREQMETFCVGELDPSDIPQLEVVAEKQKNYVPGKLVHLSKQYWAVPVAAVGISVVVTVLYLRKK* | 133 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr1g07693 | 132 | Pfam | Cytochrome b5-like Heme-Steroid binding domain | 9 | 81 | IPR001199 | - | |
| Artr1g07693 | 132 | SMART | Cyt-b5-2 | 8 | 81 | IPR001199 | - | |
| Artr1g07693 | 132 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
| Artr1g07693 | 132 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
| Artr1g07693 | 132 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
| Artr1g07693 | 132 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
| Artr1g07693 | 132 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
| Artr1g07693 | 132 | SUPERFAMILY | Cytochrome b5-like heme-steroid binding domain | 4 | 89 | IPR036400 | - | |
| Artr1g07693 | 132 | PANTHER | CYTOCHROME B5 | 4 | 126 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
| Artr1g07693 | 132 | Gene3D | - | 4 | 94 | IPR036400 | - | |
| Artr1g07693 | 132 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
| Artr1g07693 | 132 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr1g07693 | K23490 | cytochrome b5 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 475508 | Artr | Artr1g07693 | Artr-Chr1:224750060 | Artr3g04411 | Artr-Chr3:134372754 | |
| 570672 | Artr | Artr1g07689 | Artr-Chr1:224659528 | Artr1g07693 | Artr-Chr1:224750060 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Artr1g01957 | . | 51 | 273 | NADPH P450 reductases gene family | AT5G17770 | 36.735 | 1.19e-47 | 161.0 | |
| Artr1g02117 | . | 4 | 281 | NADPH P450 reductases gene family | AT5G17770 | 68.571 | 1.68e-137 | 387.0 | |
| Artr1g04955 | ACH | 1 | 133 | NADPH P450 reductases gene family | AT5G53560 | 69.925 | 9.11e-69 | 202.0 | |
| Artr1g07689 | . | 1 | 134 | NADPH P450 reductases gene family | AT1G26340 | 62.687 | 3.72e-58 | 174.0 | |
| Artr1g07693 | . | 1 | 134 | NADPH P450 reductases gene family | AT1G26340 | 62.687 | 9.56e-58 | 174.0 | |
| Artr2g02103 | . | 39 | 281 | NADPH P450 reductases gene family | AT5G17770 | 39.464 | 1.21e-62 | 198.0 | |
| Artr2g09249 | . | 47 | 120 | NADPH P450 reductases gene family | AT1G60660 | 79.73 | 5.79e-44 | 136.0 | |
| Artr3g02293 | ACH | 1 | 126 | NADPH P450 reductases gene family | AT5G53560 | 52.308 | 1.05e-46 | 146.0 | |
| Artr3g04411 | . | 7 | 133 | NADPH P450 reductases gene family | AT2G32720 | 75.591 | 9.76e-74 | 214.0 | |
| Artr3g05068 | . | 31 | 281 | NADPH P450 reductases gene family | AT5G17770 | 83.665 | 2.26e-161 | 447.0 | |
| Artr3g05327 | . | 31 | 281 | NADPH P450 reductases gene family | AT5G17770 | 68.379 | 9.63e-128 | 362.0 | |
| Artr3g07969 | . | 2 | 120 | NADPH P450 reductases gene family | AT1G60660 | 61.345 | 9.93e-50 | 152.0 | |
| Artr4g00252 | . | 100 | 197 | NADPH P450 reductases gene family | AT5G17770 | 53.061 | 1.21e-31 | 110.0 | |
| Artr4g12391 | . | 6 | 130 | NADPH P450 reductases gene family | AT2G32720 | 48.031 | 2.10e-43 | 137.0 | |
| Artr5g06107 | ACH | 1 | 134 | NADPH P450 reductases gene family | AT5G48810 | 50.746 | 1.45e-47 | 148.0 | |
| Artr5g07479 | . | 6 | 83 | NADPH P450 reductases gene family | AT1G26340 | 38.462 | 2.75e-14 | 65.9 | |
| Artr6g04874 | . | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 39.535 | 8.20e-50 | 176.0 | |
| Artr6g04879 | . | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 38.132 | 1.14e-48 | 172.0 | |
| Artr6g07137 | . | 38 | 273 | NADPH P450 reductases gene family | AT5G17770 | 37.984 | 6.46e-49 | 173.0 | |
| Artr6g10075 | . | 1 | 132 | NADPH P450 reductases gene family | AT5G53560 | 58.333 | 3.17e-56 | 170.0 | |
| Artr6g10080 | ACH | 1 | 128 | NADPH P450 reductases gene family | AT5G53560 | 58.915 | 8.68e-55 | 166.0 | |
| Artr7g00279 | . | 2 | 120 | NADPH P450 reductases gene family | AT1G60660 | 62.185 | 1.56e-50 | 154.0 | |
| Artr7g11144 | ACH | 2 | 133 | NADPH P450 reductases gene family | AT5G53560 | 62.879 | 3.80e-63 | 187.0 | |
| Artr9g04382 | . | 1 | 30 | NADPH P450 reductases gene family | AT5G53560 | 63.333 | 2.98e-07 | 42.7 | |
| Artr9g05718 | . | 137 | 197 | NADPH P450 reductases gene family | AT5G17770 | 57.377 | 1.03e-18 | 75.1 |