AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g10780 ATGTCTTTTACAGTTATACCAAATCTCTCACCACCATCTTTCACTCGTATTCATCATAAACCATCATCATTATCATCTTCTTTACCATCATCTACTTCTTGTTGTGTTAATAATAGTTATCAAAATCATGGTGAAATGGTTTTGCAATCTTCTGTTGAAACATCACCTCTTCGGGTTCGGGTTTCGCCACCTGAGGAGGATCCTAGGCAAGAGTTTTATGTTAATGTAGGAATAGCTGTTAGGACTCTTAGGCATGATTTGCCTCTATTGTTTTCTGAGGATCTTGATTATGGTATTTACAGGGATGATATCACATTTGTTGATCCTCTCAACAAATTCACCGGTATAGACAACTACAAGCTCATTTTCAGGGCACTACGTTTCCATGGTCGAATACTATTCAAAGATATCTCATTAGAGATTTACAGGGTTTGGCAGCCTTCAGAGAACCTAATTTTGATCCGTTGGAATCTTAAAGGAGTCCCTCGTGTTCCCTGGGAAGCCAAAGGCGAGTTCCAGGGCACTTCCCGTTATAAATTGGATCGAAAAGGTAAAATTTATGAGCATAAAGTTGATAATTTGGCTTTCAATTTCCCACACCAGCTTAAACCGGCTGTATCTGTTCTTGACTTGGTGGCTGCTTCTCCTCCTGCAACACCTAATCCTACGTTTTCATGGGGCCCTTTGGATTCAACTTACTCGTCTTCATGGCTAGATTTCTATCGGGCGGTTAAGAACACGTTGGATCCTGGTCGAGATTATATGGTTTTACAAGATTGTCAACTAGTTGCTACTTGTGTATAG 804 40.17 MSFTVIPNLSPPSFTRIHHKPSSLSSSLPSSTSCCVNNSYQNHGEMVLQSSVETSPLRVRVSPPEEDPRQEFYVNVGIAVRTLRHDLPLLFSEDLDYGIYRDDITFVDPLNKFTGIDNYKLIFRALRFHGRILFKDISLEIYRVWQPSENLILIRWNLKGVPRVPWEAKGEFQGTSRYKLDRKGKIYEHKVDNLAFNFPHQLKPAVSVLDLVAASPPATPNPTFSWGPLDSTYSSSWLDFYRAVKNTLDPGRDYMVLQDCQLVATCV* 268
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g10780 267 PANTHER RIKEN CDNA 2310061I04 GENE 42 213 IPR018790 -
Artr3g10780 267 Pfam Uncharacterized conserved protein (DUF2358) 79 189 IPR018790 -
Artr3g10780 267 SUPERFAMILY NTF2-like 96 190 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g10780 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:363513065 Artr5g05904 Artr-Chr5:197847259 dispersed