AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g10786 ATGAATAGTAATCCAGCTACTCCGATGAACGCAAACGCCGCCTCTTCTAGTGGGTCTCCCGATCCAAACACTCCCAGACGTAACTCTAAGCGACCTAAATATTCTAGGTTTACACAGCAGGAGCTTCCAGCTTGCAAACCGATTCTTACCCCCAAATGGGTGATCTCAGCTTTCATGCTTGTGACAATTGTCTTCATCCCAATAGGACTTGTCTCCCTCTTCGCGTCTCGTGATGTTGTTGAGATTGTTGACCGGTACGATAACGCCTGCCTAACAGGCTCAAAAAGTCAAAAGATCCAAGCTATACAAAATGCTACTAGTAATAAAACCTGTGTCAGAAGCATAACAGTCACAAAGCGAATGAAGCAGCCTATCTACATCTATTATCAGCTCGATAACTTCTATCAGAATCATCGCAGGTACGTCAAGAGCCGAAGTGATACTCAGTTGAGAAACCGAGGTGACGAGAACGACACAAGTACATGCAAGCCTGAAAATGACGCAAATGGAATGCCGATTGTGCCCTGTGGTCTTGTAGCATGGAGTTTGTTTAATGACACTTATAGCTTCTCCACAAGTACCAACCCAGCATTGCGTGTAAACAAGAGGCATATTTCATGGAAGAGTGACAGGGATGACAAGTTTGGCAGTGACGTCTTCCCGAAAAATTTCCAGAATGGAAGTCTTATTGGTGGTGGACGTCTCAATGTGTCTATACCGTTAAGTGAGCAAGAAGACCTAATCGTGTGGATGCGAACTGCGGCTCTTCCAACTTTTAGGAAGTTGTATGGGAAGATAGAAGAAGATATTGAGGCAGGCGAGACAATAAACGTGGTATTAGAGAACAGATACAACACATATAGTTTCAGTGGCAAGAAGAAACTCGTGCTTTCGACAACCAGCTGGCTTGGTGGAAAGAATAACTTTATTGGCATTGCATATCTTTCTGTTGGGGGCTTGTGCTTCTTACTAGCAACAACTTTCACCATCATATATTTGTTTAAGCCAAGGCATCTTGGAGATCCTAGTTATTTGTCATGGAACCGGAACCCAGGTGGTCACTGA 1065 44.04 MNSNPATPMNANAASSSGSPDPNTPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLVSLFASRDVVEIVDRYDNACLTGSKSQKIQAIQNATSNKTCVRSITVTKRMKQPIYIYYQLDNFYQNHRRYVKSRSDTQLRNRGDENDTSTCKPENDANGMPIVPCGLVAWSLFNDTYSFSTSTNPALRVNKRHISWKSDRDDKFGSDVFPKNFQNGSLIGGGRLNVSIPLSEQEDLIVWMRTAALPTFRKLYGKIEEDIEAGETINVVLENRYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLSVGGLCFLLATTFTIIYLFKPRHLGDPSYLSWNRNPGGH* 355
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g10786 354 MobiDBLite consensus disorder prediction 1 36 - -
Artr3g10786 354 MobiDBLite consensus disorder prediction 145 162 - -
Artr3g10786 354 PANTHER CELL CYCLE CONTROL PROTEIN 50 26 346 IPR005045 GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro)
Artr3g10786 354 Pfam LEM3 (ligand-effect modulator 3) family - CDC50 family 73 337 IPR005045 GO:0016020(InterPro)
Artr3g10786 354 PIRSF Lem3-Cdc50 4 350 IPR005045 GO:0016020(InterPro)
Artr3g10786 354 MobiDBLite consensus disorder prediction 1 25 - -
Artr3g10786 354 MobiDBLite consensus disorder prediction 145 166 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g10786 K26935 cell cycle control protein 50
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr1:16631321 Artr3g10786 Artr-Chr3:363597168 dispersed
Artr Artr-Chr3:363597168 Artr9g01540 Artr-Chr9:59284226 dispersed