AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g10840 | ATGAACATCGAAATACACGGTCGTCACGCTCTACTCTTCGACGACGATGCCACGTCAGCGTTCGTCAACTCAGAAGACGCACTCGTCGAATGGAACTCACTCTTAATCGACCGTTACGACGTCCGGCATCTCCTCTCCGGTCCTCCGCCGTTTCGACGACGGCGTAATCCACAAACGTCATCACATTCGTCTTCTGCTGATGCTGAGATTGAATATGAACGGTATCTGGATTTACCGTCTGAAAATGAAGAGCACGAAGAAGATGCAAATCCGGAACCTGTGGGTGGATTCAATGCTGTTCCTTTTTCTTATGGAAATTACGAGGATTCTAGTGAACAAAAGATTGCTGAGACTGAATCGGAAATACCTCAATTTCATCCCCCTTTCCCTGTTCCTGACAGTCTGGTTCAAAACTTGCCCCCTACAGAGAAAGTACATCAAATTATTGCAAGGACAGCTCTTTTTGTCAGTAAAAATGGAGGTCAATCTGAGATTGTTTTGAGGGTGAAGCAAGGAGACAATCCAACCTTTGGGTTCTTAATGCCTGATCATCACCTACATCCGTACTTCAGGTTTCTGGTGGATCACCAAGATCTTCTTCAGTCAAAAGAGGACAAACAGACTGAAAATGAGGAAACATCCAATACTGGAGCATTGTCTTTACTTGGTTCTGTTTATGGCAATGGTGAGGATGATGATGTTGGAGCAGAGCATGCATCATCATCAACTAAAGAGGTCGTGGATGTAGATGCTACAATGTTGCCAGTTGGTAAAGACGAGCCTGTTTCAAAGCAGTCGATTTCCTCCAAGGAAGATGTTCTTATAATAAAAAGGAATTCTTTATCAAATGCTTTGAAGCCTGTACGTACTAGCAGTCTGAGGAAAGATGATTTCTCAGGTTCAGTCTCTGCTGTTCCTGATAAGTTACGTGCTTCTTCTCTTCCCCCAATTCCCAAGAATGAGCATATTCTTGTGGATCCTTCATCCGAAATGAAACTGCTGGTTGACAAGATAGTTGAGTTCATCATGAAGAATGGGAGGCAGTTTGAGACAGTACTTATGGAACAAGACCGTGGTCATGGAAGATTCCCATTCTTACTCCCATCTAATATATTTCATCCGTACTATTTAAAGGTTCTCCGGGAAGCCCAGGAGACGAAGTTAACGGCAAAGAGTTTCCACAATGAGAAGGAAGATTCCAGAGGACATATCTCAAGCAAGAAACTTAAGGTTGATGAGAAATCTTTGGTGGAACCTGATGATATACCACTTGATTCTGAAAGGAAAGAGAAGTTTAAGATGGTAATCAACAAACCTAAAAGGGAAGGATCAGATGTGCCAGCTAAAGCCACAGAACAGTCACCTGGAATCCAGGTGGATGCCACTCAAGCAGCAGCTATTCTTCAGGCTGCTACAAGAGGCATTAAGCCTCCAAATTTAGGAAATTTTTTTGGACAACCCTCTAGTGAAGCCGATTCCTCTGACACACATTTGACTCATGAGCAGAAATTGAAGGCTGAGAGGCTTAAAAGAGCTAAGATGTTTGTGGCTCAGCTGAAAAGTGGAGCTGCTCCATCAAAAACCGAACCCTCGCGTGGCGTATCAGCTGAGCCACAAGGATCAGTGGCTGAAAATAGTCACAGCACAACCCCTATAGATTTTCATACTAAAGACGAGATAGTAAAAACAGAGAAGATAGTAAAAACAGAAGAAGAACATTTGAATGATGAAAAACGAGCAAAGAGGAAATATCGTGCTAGGAAAGATGAAGAAGGTGACACATCAGAAGATGACGACGTGGTTGATGAGAGAGAAGGAAAAAGGTCGCATAGACACCGTACAGAAAAACATCGATCGCGTGATCATGTAAAAAAACACCGATCACATCGTTCTTCCCGTAAACATGATGAAGAAAGGGATCGTGATTACTCGAGGAAAAATAAACATCAATCATCTAGCTCTTACGAAGATGATGAACATGAAAGTGAACATGAATATGCCAGAAAGAAGCACCGGTCACATCGTTCTTCACATGATGAACACGAAAGTGAACATGAATATGCGAGAAAGAAGCACCGGTCACATCGTTCTTCACATGATGAAGATGAAGTTGACAGTGACGATAAATATTCAAGGAAAAAGAGAACACATAGATCTCACAAGTCTTCTCATCACAGTAGAGATAAACATAAGCATAGGAAGAGTCACTCTTATAGGCATAGACAGAAGCCTGATGTCTCTTCAGAAGAAGAGCTAAGGGATCATAATAAGGCTGAAAAACATAAACAGGGTTCAAATTCGGAGATAGAAGAACTGGAAGAGGGAGAGATCAGTTCGAAATTGTCTGGTCAGTCTAGAGGAGATCCATTTGTTAATGGTGCTAGCAGAGAACCGTCGGTCGATGTATCGAGTCAAGATAGGAGACCACTGACTCAACCTGTAGAGACAGCTGAGGTTCCTGATGATCTTAGGGCCAAAGTGAGAGCAATGTTGTCCACATTGTAA | 2505 | 42.63 | MNIEIHGRHALLFDDDATSAFVNSEDALVEWNSLLIDRYDVRHLLSGPPPFRRRRNPQTSSHSSSADAEIEYERYLDLPSENEEHEEDANPEPVGGFNAVPFSYGNYEDSSEQKIAETESEIPQFHPPFPVPDSLVQNLPPTEKVHQIIARTALFVSKNGGQSEIVLRVKQGDNPTFGFLMPDHHLHPYFRFLVDHQDLLQSKEDKQTENEETSNTGALSLLGSVYGNGEDDDVGAEHASSSTKEVVDVDATMLPVGKDEPVSKQSISSKEDVLIIKRNSLSNALKPVRTSSLRKDDFSGSVSAVPDKLRASSLPPIPKNEHILVDPSSEMKLLVDKIVEFIMKNGRQFETVLMEQDRGHGRFPFLLPSNIFHPYYLKVLREAQETKLTAKSFHNEKEDSRGHISSKKLKVDEKSLVEPDDIPLDSERKEKFKMVINKPKREGSDVPAKATEQSPGIQVDATQAAAILQAATRGIKPPNLGNFFGQPSSEADSSDTHLTHEQKLKAERLKRAKMFVAQLKSGAAPSKTEPSRGVSAEPQGSVAENSHSTTPIDFHTKDEIVKTEKIVKTEEEHLNDEKRAKRKYRARKDEEGDTSEDDDVVDEREGKRSHRHRTEKHRSRDHVKKHRSHRSSRKHDEERDRDYSRKNKHQSSSSYEDDEHESEHEYARKKHRSHRSSHDEHESEHEYARKKHRSHRSSHDEDEVDSDDKYSRKKRTHRSHKSSHHSRDKHKHRKSHSYRHRQKPDVSSEEELRDHNKAEKHKQGSNSEIEELEEGEISSKLSGQSRGDPFVNGASREPSVDVSSQDRRPLTQPVETAEVPDDLRAKVRAMLSTL* | 835 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 520 | 557 | - | - | |
| Artr3g10840 | 834 | SUPERFAMILY | Surp module (SWAP domain) | 124 | 195 | IPR035967 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | Pfam | Surp module | 147 | 195 | IPR000061 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | Pfam | Surp module | 334 | 382 | IPR000061 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | Coils | Coil | 755 | 775 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 571 | 592 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 633 | 668 | - | - | |
| Artr3g10840 | 834 | Gene3D | Surp module | 318 | 389 | IPR035967 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 46 | 70 | - | - | |
| Artr3g10840 | 834 | Coils | Coil | 567 | 587 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 204 | 224 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 797 | 811 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 713 | 740 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 676 | 712 | - | - | |
| Artr3g10840 | 834 | SUPERFAMILY | Surp module (SWAP domain) | 311 | 382 | IPR035967 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | SMART | surpneu2 | 332 | 385 | IPR000061 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | SMART | surpneu2 | 146 | 199 | IPR000061 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | PANTHER | SPLICING FACTOR SUPPRESSOR OF WHITE APRICOT | 3 | 818 | IPR040397 | GO:0000395(PANTHER) | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 571 | 822 | - | - | |
| Artr3g10840 | 834 | Pfam | Alternative splicing regulator | 3 | 87 | IPR019147 | - | |
| Artr3g10840 | 834 | ProSiteProfiles | SURP motif repeat profile. | 334 | 376 | IPR000061 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | SMART | DRY-EERY-2 | 1 | 108 | IPR019147 | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 741 | 777 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 475 | 500 | - | - | |
| Artr3g10840 | 834 | Gene3D | Surp module | 141 | 196 | IPR035967 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | ProSiteProfiles | SURP motif repeat profile. | 148 | 190 | IPR000061 | GO:0003723(InterPro)|GO:0006396(InterPro) | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 532 | 550 | - | - | |
| Artr3g10840 | 834 | MobiDBLite | consensus disorder prediction | 610 | 632 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g10840 | - | - |