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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g10949 ATGCATGATTTTTGCTTCACAATCCCATATGGAATGATAGTGTTTTGTGGTGGGATAATTGGGTTTGTAAGGAAAGGTAGTACGACGTCGTTAGCTGGTGGTGTTGGCACTGGATTGTTGCTTTTCTTTGCTTCTTATTTGACTTTATCTGCTTTTCATAAGAAAATGAATTCTTGGTTTGGCTTGCTTCTTGAAACTGTTATTGCTGCTACTCTCACATGGGTTATGGGACAAAGATTTGCCGAAACTTCCAAGATAATGCCTGCTGGTGTTGTTGCCGGTATCAGTGGATTGATGACAGCATTTTATCTATACAAGATTGTCACTGGAGGCAACCATTTTCCAGCCAAGACTGAATGA 360 40.28 MHDFCFTIPYGMIVFCGGIIGFVRKGSTTSLAGGVGTGLLLFFASYLTLSAFHKKMNSWFGLLLETVIAATLTWVMGQRFAETSKIMPAGVVAGISGLMTAFYLYKIVTGGNHFPAKTE* 120
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g10949 119 Gene3D - 1 111 IPR044890 -
Artr3g10949 119 Pfam Transmembrane proteins 14C 6 103 IPR005349 GO:0016020(InterPro)
Artr3g10949 119 PANTHER TRANSMEMBRANE PROTEIN 14, 15 1 108 IPR005349 GO:0009706(PANTHER)|GO:0015245(PANTHER)|GO:0015908(PANTHER)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g10949 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
507157 Artr Artr3g10949 Artr-Chr3:369632135 Artr4g05072 Artr-Chr4:169066907