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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11005 ATGGCATCAATGACAACAACTTTCACCTCACCACTCTACACCAAAACCCAATCATCCTTCCATGGAGTCCCGGTTGTTAGAATGATCCAACCAGTCAAATCATCCAACAAAACAAACAACACACCCATTACCATGTCATATGATCTTGGATCATTCACGTTCCAACCCATTAAGGAAGCTATTGTCTCACGTGAAATGACTAGGAGGTACATGACTGACATGATTACTTATGCTGATACTGATGTTGTTGTTGTTGGTGCTGGATCTGCTGGTTTGTCTTGTGCTTATGAGCTTAGCAAAAACCCTAACGTTCAGGTAGCTATCATTGAGCAATCCGTGAGCCCAGGTGGTGGTGCATGGCTAGGTGGACAACTATTCTCAGCAATGGTTGTCCGCAAGCCTGCCCACCACTTCCTTGACGAGCTCGAGATCGAGTACGATGAGCAAGAAGACTATGTTGTCATCAAGCACGCCGCTTTGTTCACATCAACCATCATGAGCAAGCTTTTGGCTAGGCCAAATGTCAAGCTCTTCAACGCGGTTGCAGCTGAGGACTTGATCATCAAGGGAGGAAGAGTAGGCGGTGTTGTGACCAACTGGTCTTTGGTCGCACAGAACCATGACACACAATCATGCATGGACCCTAATGTTATGGAGGCTAAGGTTGTTGTCAGCTCATGTGGTCATGATGGGCCCATGGGCGCTACTGGTGTTAAGAGGCTTAGGAGTGTTGGCATGATCGACAGCGTTCCTGGGATGAAGGCTCTCGACATGAACACTGCTGAAGATGCGATTGTGAAGCTGACTAGAGAGATTGTTCCTGGTATGATTGTTACCGGGATGGAAGTTGCTGAGATCGATGGATCTCCCAGGATGGGGCCAACTTTTGGTGCTATGATGATATCAGGACAGAAGGCAGCTCATTTGGCCTTGAAGGCGTTGGGACTCCCAAATGCATTGGATGGAACATTGGTGGGAAGCCTCCACCCGGAGCTTATCCTGGCTGCTGCCGACTCTAGCGAGACTGTTGATGCCTAA 1038 48.36 MASMTTTFTSPLYTKTQSSFHGVPVVRMIQPVKSSNKTNNTPITMSYDLGSFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVGGVVTNWSLVAQNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIDSVPGMKALDMNTAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTLVGSLHPELILAAADSSETVDA* 346
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11005 345 Gene3D - 48 78 - -
Artr3g11005 345 PANTHER THIAMINE THIAZOLE SYNTHASE 11 344 - -
Artr3g11005 345 FunFam Thiamine thiazole synthase, chloroplastic 79 314 - -
Artr3g11005 345 Pfam Thi4 family 63 296 - -
Artr3g11005 345 Gene3D - 79 314 IPR036188 -
Artr3g11005 345 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 2 323 IPR027495 GO:0009228(InterPro)
Artr3g11005 345 NCBIfam sulfide-dependent adenosine diphosphate thiazole synthase 59 314 IPR002922 -
Artr3g11005 345 SUPERFAMILY FAD-NAD(P)-binding domain 43 307 IPR036188 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11005 K03146 cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60]
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Event-related genes

Select Gene_1 Gene_2 Event_name
22249 Artr1g13629 Artr3g11005
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
648890 Artr Artr1g13629 Artr-Chr1:445200374 Artr3g11005 Artr-Chr3:370770440