AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11047 ATGACTGGCATACAACTTGAGGTAGTATTAGAGGACCAGTCTCCACATAAATGGCGTGTTCCTTTAAAAGAAGACGTTTTTGCTGCATTTATGGCCAAAGGAGGTCCGATGGTGCATAAGGTTTTTGGTGATAAATCATTGTTTGGACCATTATTGTTTAAAAAGTTTTTTGATCCATCAGATGCGTTTCCACTTTGGGAATTTGAACCAGGTTTATTGTTGTCTGATCTTCAGAACCCGTGTGTGGATTGGTTTCAAACGGACGGGTGTTATATTTTAAAATCCGAACTACCAAAATTGGACAAAATCAGCATTCAAGTTTATGTCGACAACGGGAAAGTTATGGAAATCAGTGGGCTATGGAAGCACAAAGGAGAATCCCGTGCAGTGGACTGGAGGAGTGGCAAATGGTGGGAACATGGCTTTGTTCGGAGGCTAGAATTGCCTGAAAACACGGATTGGAAGAAAATCGAGGCGTATGTGAATAATGACACGATTTTGGACATTAGACTTCCAAAGACTTCATTGGAATGCAATGTTCCTCGAGGAAACTTGGGGGTGCTCAAAGAATCTGCATCTGCTAGCACTTAA 591 41.62 MTGIQLEVVLEDQSPHKWRVPLKEDVFAAFMAKGGPMVHKVFGDKSLFGPLLFKKFFDPSDAFPLWEFEPGLLLSDLQNPCVDWFQTDGCYILKSELPKLDKISIQVYVDNGKVMEISGLWKHKGESRAVDWRSGKWWEHGFVRRLELPENTDWKKIEAYVNNDTILDIRLPKTSLECNVPRGNLGVLKESASAST* 197
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11047 196 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 72 188 IPR002068 -
Artr3g11047 196 Pfam Hsp20-alpha crystallin family 84 176 IPR002068 -
Artr3g11047 196 Gene3D - 51 180 IPR008978 -
Artr3g11047 196 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 4 180 - -
Artr3g11047 196 SUPERFAMILY HSP20-like chaperones 57 175 IPR008978 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11047 - -