AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11228 ATGGGTTTGCCTATCAAACTCGCTATAGCATCCACAACTGTCATGTCAACCGCGGTCATGATCAAGGTCATAACACCTGTTATCATGAACCTCGCGATATCAGACATCCCTACCATATGGATGTCTGTTATCGCGTGGCTTAAACCACCTTATCTTTACATTGTTATTAATTGTATTATTATAACACTAGTTGCCTCGTCAAAATTACAATCAAAACTCGACAGTTATCACTCCATGTCAACTTACACTGCCCCTGTCCTGGTTCATAATGAGCAGGTCAAGGTCGTGCTTCCACCTGTAGAGCTGCCACCGGTTCATATACCAGAAGTGTCGTACCACGACACTTTATTGGTAAATGAACCAGTAAAGTTCGATAGTCAACCAAAATATGTTCACGTACCTGAACCAGATTACACTACTAAATTTGCTCAGATACCCGAACAAGATTTTAGCGATAAATATGTTCACGTACCTGAACAAGATTTTAGCGATAAATTTGTTCAAGAACCTGAACAAGATGTGGGTAATCATCCTTTTATTGATGAAGACATGAAGATAGCAAAAAAAGCTTACGAAGAGATGAAGAGGAATAAGGTTAAGAAATCTGTAATCTCGATGTCAACTTGGACACCACCCAAAATGAATCAAGTGGATCTCGGTTTTTCGGCTGAGAAACCACCGGCTTCAGCCAGATTTAGCCATCGAAAACCTGTCAAAGGCGCACATGAAGGTGGAAGAAGATTGGGAGTAGCAAAACCTAAAAAGCAAGACACGCTGGAGAACACGTGGAAGACAATCACGGAGGGTCGGTCGGTGCCTTTAACTAGGCACCTCTGTAAATCCGAGACATGGGAGACCCACGGTCAGAGCCATGAAAATCGCAACTCTGAGGAGCTGAATGATCATCACTTGTCAAAATCAGATACATTTAATGTCAGCCGTGGTGAGGCCGGAGCCAGAAAGCCTCCGGCCGCACCGTCAAAGCTGAACAAATCTGGCGGGTCCGGAAGGCTAAGAAAGGACCCGTCGCTGGGACAAGAAGAGTTGAATAGGAAAGTGGAAGCATTCATCAAGAAATTTAACGAGGATATGAGACTACAAAGACAAGAATCTATGAATCAATTCATGGAGATGATAAACCGTGGGGCTCATTAA 1155 43.29 MGLPIKLAIASTTVMSTAVMIKVITPVIMNLAISDIPTIWMSVIAWLKPPYLYIVINCIIITLVASSKLQSKLDSYHSMSTYTAPVLVHNEQVKVVLPPVELPPVHIPEVSYHDTLLVNEPVKFDSQPKYVHVPEPDYTTKFAQIPEQDFSDKYVHVPEQDFSDKFVQEPEQDVGNHPFIDEDMKIAKKAYEEMKRNKVKKSVISMSTWTPPKMNQVDLGFSAEKPPASARFSHRKPVKGAHEGGRRLGVAKPKKQDTLENTWKTITEGRSVPLTRHLCKSETWETHGQSHENRNSEELNDHHLSKSDTFNVSRGEAGARKPPAAPSKLNKSGGSGRLRKDPSLGQEELNRKVEAFIKKFNEDMRLQRQESMNQFMEMINRGAH* 385
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11228 384 PANTHER COTTON FIBER (DUF761) 15 382 - -
Artr3g11228 384 MobiDBLite consensus disorder prediction 283 349 - -
Artr3g11228 384 MobiDBLite consensus disorder prediction 227 260 - -
Artr3g11228 384 MobiDBLite consensus disorder prediction 236 260 - -
Artr3g11228 384 MobiDBLite consensus disorder prediction 283 309 - -
Artr3g11228 384 Pfam Cotton fibre expressed protein 346 381 IPR008480 -
Artr3g11228 384 Pfam Domain of unknown function (DUF4408) 37 69 IPR025520 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11228 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:13357808 Artr3g11228 Artr-Chr3:379105352 dispersed