AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11335 ATGCCATCAACACTCCTATGTACATTCCGCAGTCATTTCATCAAACACTTGGTGTGCACTTCAATCCCAAAATCACTCCACAATGTTCCACTTCTCAAACATGGAACCACATTCATATCATCTGGTCCCACAACAAAAAACCCATCAACAATCTTAAAAAACTTCCTGAGTTTAAGGTCACTTACCACACCATTTTGTACATCTTCTGCTGATTATGAAACAACATCAGCAAAAACTGGTGCTTATTTATCAGTAGATATACAATGTAGTCAACAAGTTGCAGATATGCTTTCTGAAGCACTTTTGTGTTTTGGTGCTGTTTCCACAAGTATGGTTGAGCTAGACTCTTGTAACTCTAATCATGAGGTCTCGCTTGGTTCGATATTTACTGTATCTCATGATGTGCATCAGAGCATTGCATTGGCCGCTGATTCAGTAGGCTTAAAAGAAACACCTGTTTACAAAGTCACAACTGGTTACCAGTCTGATTGGATTGACAATGCTCGGGAATCTTTCAATCCTGTTAAAGTTAAGGAAGGGCTCTGGATTGTGCCCGAGTGGATAACTCCCCCGGATGATCAAGCAACCATTATAAGTCTAAACCCTGGGCTAGCGTTTGGAACAGGAGACCACCCGACCACCAAGCTATGTCTGTTGTTGCTACACAGTTTAATCAAAGGTGGAGAAACAGTTTTGGATTATGGGACAGGTTCAGGGATTCTTGCAATTGCAGCATTAAAGTTTGGTGCAGCTTCATCAGTTGGGTTCGATATAGATCCTCAAGCCATATCAGCTGCACGTCATAATGCTTCTTTAAACATCATAGGACCCGATAAACTGCAATTGCAGATCGTTCCTAGTAGCATTGATCCTTTGTCAACGGGCCAATGGCAATGGGCTATGACGGATAACAATGTAGAAGAGCGGGATTTAAATGATTTGGAAATTGTTACCAGAAAAGAAAAGTATGATGTGGTTGTTGCAAACATTCTTTTGAACCCATTACTAAATTTGGCCGATCATATTGTTTCTTATGCTAAGCCTGGTGGTGTAGTTGGTCTATCTGGTATTATCTTAGAGCAGGTACCAACTGTTGTAGAGCGATACTCGGGTCTTTTGGAAGATATCACTGTGTCAGAAATCGAAGATTGGGCTTGCATAAGTGGCACAAAGAGGTCGATTAGTAGCTGA 1191 41.23 MPSTLLCTFRSHFIKHLVCTSIPKSLHNVPLLKHGTTFISSGPTTKNPSTILKNFLSLRSLTTPFCTSSADYETTSAKTGAYLSVDIQCSQQVADMLSEALLCFGAVSTSMVELDSCNSNHEVSLGSIFTVSHDVHQSIALAADSVGLKETPVYKVTTGYQSDWIDNARESFNPVKVKEGLWIVPEWITPPDDQATIISLNPGLAFGTGDHPTTKLCLLLLHSLIKGGETVLDYGTGSGILAIAALKFGAASSVGFDIDPQAISAARHNASLNIIGPDKLQLQIVPSSIDPLSTGQWQWAMTDNNVEERDLNDLEIVTRKEKYDVVVANILLNPLLNLADHIVSYAKPGGVVGLSGIILEQVPTVVERYSGLLEDITVSEIEDWACISGTKRSISS* 397
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11335 396 CDD AdoMet-MTases 230 352 - -
Artr3g11335 396 Gene3D Vaccinia Virus protein VP39 171 395 IPR029063 -
Artr3g11335 396 Pfam Ribosomal protein L11 methyltransferase (PrmA) 82 391 - -
Artr3g11335 396 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 386 IPR029063 -
Artr3g11335 396 Hamap Ribosomal protein L11 methyltransferase [prmA]. 80 391 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Artr3g11335 396 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 82 393 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11335 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]