AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11403 ATGGCTCAAGAAGATCATACTCGTAGGTGTAGTAATAGTAGTAGATTGTTGAAAAAATCCAAGAAGGTGCCACAAAGAGGAATGGGTGTGGCTCAGCTTGAGAAGTTAATATTACAAGAACAACAAAAGAAAGATGTTGTTGCTATGACACCTAATTCGACTAGTTTTAGGCCATCGATGATTCCTTTACCGCCGCCCTTGCCACCTAATAATCGCCCTTTGATCACAAGATCTGAGGCTATGAATGGTGTTTTTGTGTCTAAGCCAATGAATAGTGGTAGCGGTGGTGGTAATAATTTTAGTAGATTATGGACATGTAGTGAGAATCCAAATCCAAACCAGAATCGGGCATTCGACCACCGTGGGTATGCGGTCACTATGCCGACAAATCTAGGTGGTTTGCCATATGAATCCAACGCGCTTGTTTGGTCGCCACCAGTCCCTAGATCACATTTTCAACAACCTAGTACATCATCTATGATGGAGCCCCCTTCAAACCAAAGCTATTGTGGCAACAAGTATACGCCATTGTGGCCAGACGAAGAGAAGATTGTTGGCATGAAGAGATCATACCCTTTTTTGGATGATAATATGCCAATACCCTCTTTCAATTGCAAATTTCCTTCTGCTTATGTCTCCCCAATCACAAGATTTGATGAATCAACTTCTTGTAGCAATGGATGCACTACTAGTTTAGAGCGCATGGTTCCTATTTTCAGAGAAAACCATCGAAGCCAAGGCACCATTGCAGATCAAAAAACCAAGAAACTTATTGAGAATAATCACGATCTCACCAAAGATTTTCTCACATTGGCCCCTCCTCGAGCTTCACCACAGTCACACTCAAGCTCACAAGAAAAGCTGCAGTCTTTATCTGGTCAAACAAAAGATCCATCTGTAATAGAATGGTCAAATCATCAGCAACTGCATAGTTTCTTTCCAGCAGCAAAGACTGGAAACAACAATGATGAAGCGGTGGAACATGTTGATCTCAGTTTGAAGTTATAG 1008 41.67 MAQEDHTRRCSNSSRLLKKSKKVPQRGMGVAQLEKLILQEQQKKDVVAMTPNSTSFRPSMIPLPPPLPPNNRPLITRSEAMNGVFVSKPMNSGSGGGNNFSRLWTCSENPNPNQNRAFDHRGYAVTMPTNLGGLPYESNALVWSPPVPRSHFQQPSTSSMMEPPSNQSYCGNKYTPLWPDEEKIVGMKRSYPFLDDNMPIPSFNCKFPSAYVSPITRFDESTSCSNGCTTSLERMVPIFRENHRSQGTIADQKTKKLIENNHDLTKDFLTLAPPRASPQSHSSSQEKLQSLSGQTKDPSVIEWSNHQQLHSFFPAAKTGNNNDEAVEHVDLSLKL* 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11403 335 MobiDBLite consensus disorder prediction 1 28 - -
Artr3g11403 335 PANTHER OS01G0212500 PROTEIN 6 335 IPR040356 GO:0003700(InterPro)
Artr3g11403 335 MobiDBLite consensus disorder prediction 272 297 - -
Artr3g11403 335 Pfam Plant transcription factor NOZZLE 17 59 IPR014855 GO:0003700(InterPro)
Artr3g11403 335 MobiDBLite consensus disorder prediction 275 297 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11403 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr2:142841903 Artr3g11403 Artr-Chr3:385183291 wgd