Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g11470 | ATGATACAAGTAGCTATGGCTACTTCTTCGCTCTCGTTAATTCTCTTATGTTTGTTCATATCATTCTCAATATCAAATGCCATTGTTCCTTCGGCTGACACCTTCCGATATGTCAACGAAGGTGATTTTACAGACCAAAATGACTCTGAATACGTCCCAAACTCTGAATACACCACAACCTATCGTAACCTTGATCTATTTACCTTCCCTTTTCGACTTGTTTTCTACAACACCACCCCAAATGCCTATTATCTTGGTCTTCGTATGGGGAACAGACGTGATGAATCTCTCATGCGATGGGTCTGGGAAGCCAACCGTGGCATCCCAGTACGAGAAAATGCCACGTTTTCATTAGGTTCTGATGGGAACCTAATTTTGGCCGAATCAACCGGCCAAATTGTATGGCAAACCAATACCGCCAATAAAGGCGTCGTTGGTTTTGTCATAGAGTCAGATGGTAACATCGTGCTGAAAGACTCAAGTGGCAACTTCGTATGGCAGAGTTTTGACTCACCTACCGACACTCTCTTGGTAGGCCAAACTTTACGAGTTAACGGAGGCCCTTTCAAGCTCGTGAGTAGGGATTCGATCGCTAACAACGTTAACGGAGCATATAGTTTCGTAATAGAGCCTAAAAGACTGGCTTTGTATTATAAGAACAGCATGCGTTATTGGTCATCCACCTTCCCTGAATTAAACCGAGCAAATGTGACTTTAGTTAATGCAACGTTACGCATTGCAGAAGCCGAGTATGAAGAGAACAATTTTCACGTACTTCAGTGTCGTTTAGAGAACGCTCGAGACTTTGAACAACCGAATTTGTCTTTTGGAAGGATTCGATACAATAGCTCGTTATCGTATCTTCGACTAGGCATCGATGGGAACCTAAGACTCTACACTTATCGTAGAGGTGTGCGGGGAGACGCGTGGGCGTTATTGTTCACTTTGTTTGATGGAGGTGTAAAAACCAGTAGGGCGGCAGATGATCCAGTAGATGAATGTCAGTTACCAAGTCGATGCGGAAAATTTGGGCTTTGCGAGGAAAGCCAATGTGTTGGGTGCCCAACGCCAAACGGGGTGTTTGCGTGGAGCAAAGATTGCGATGTGAAGTTGCCTAGCTGTAATGCGAGCAGTTTCAAATATTACGAGCTTAAAGGGGTTGATCATTTCACTGTGAAGTATACATCCGGGACTGAATCTAACTTGGATAGTTGCAAGAACAAATGCACGAAGGATTGTAAGTGTATGGGGTATTTTTATCACACCGATCGGTCGAAGTGTTGGACAGTTAACGAGCTGAAGACGTTGACAAGAACCGGGAACTCGACATATTTGGCGTACATCAAAACGCCCGTAAGCTAG | 1362 | 44.2 | MIQVAMATSSLSLILLCLFISFSISNAIVPSADTFRYVNEGDFTDQNDSEYVPNSEYTTTYRNLDLFTFPFRLVFYNTTPNAYYLGLRMGNRRDESLMRWVWEANRGIPVRENATFSLGSDGNLILAESTGQIVWQTNTANKGVVGFVIESDGNIVLKDSSGNFVWQSFDSPTDTLLVGQTLRVNGGPFKLVSRDSIANNVNGAYSFVIEPKRLALYYKNSMRYWSSTFPELNRANVTLVNATLRIAEAEYEENNFHVLQCRLENARDFEQPNLSFGRIRYNSSLSYLRLGIDGNLRLYTYRRGVRGDAWALLFTLFDGGVKTSRAADDPVDECQLPSRCGKFGLCEESQCVGCPTPNGVFAWSKDCDVKLPSCNASSFKYYELKGVDHFTVKYTSGTESNLDSCKNKCTKDCKCMGYFYHTDRSKCWTVNELKTLTRTGNSTYLAYIKTPVS* | 454 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g11470 | 453 | SMART | blect-4 | 55 | 172 | IPR001480 | - | |
| Artr3g11470 | 453 | PIRSF | SLG | 3 | 453 | IPR035446 | - | |
| Artr3g11470 | 453 | Pfam | D-mannose binding lectin | 101 | 185 | IPR001480 | - | |
| Artr3g11470 | 453 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 96 | 227 | IPR036426 | - | |
| Artr3g11470 | 453 | Gene3D | - | 41 | 171 | IPR036426 | - | |
| Artr3g11470 | 453 | ProSiteProfiles | Bulb-type lectin domain profile. | 49 | 170 | IPR001480 | - | |
| Artr3g11470 | 453 | CDD | B-lectin | 55 | 172 | IPR001480 | - | |
| Artr3g11470 | 453 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 52 | 450 | IPR051343 | - | |
| Artr3g11470 | 453 | CDD | PAN-AP-plant | 373 | 451 | - | - | |
| Artr3g11470 | 453 | ProSiteProfiles | PAN-Apple domain profile. | 374 | 449 | IPR003609 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g11470 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr3:388262210 | Artr3g11486 | Artr-Chr3:388696875 | dispersed | |
| Artr | Artr-Chr3:388262210 | Artr3g11477 | Artr-Chr3:388432463 | proximal |