AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11535 ATGGGGGATATTGAAACCCTAGGGATCCTTGATGAAATTCAATCACTCATTTCCGATAAGCTTCAAGTGGTTTCTTACAAGTGGCTGAGTAGGAACTTTTTGGTGCCATCAAATACTGCGAAGAGGTTGCTTCAAGAGTTTGTGGAAAAGAATGGAAGTCAACTCAAAGTTATATATTCTCTGTCCGGATGGTTGAAGAACAATCCAGAAGCTTACCATGTTAAGCTTGTACTGGGTTCGAAACTTTCAGAAGCCAAAGGAGATTTTGGTGACGGGTGCTCAGTTCAAGTCTATAGTGTCCAAGCGAGTGTTCCCAAGGATCCAGCCGTACTTTGGAATGCTGAATTTATACAATCAGAAGAGCTCTTTAAGGAGCCCCCTAATGTTGATAATTGCTTGCGGGATAACCGGTTTTGTGGGGTTTCAAATTCATTTGTAAAACGCAACACAGAGGGAACACCTGGAACCAGCACAGGTCCATCCTTGAAAAATGTAGGAATCCCTGGACCATCGAGATCTAATATTTCTAATCAAACTTCGAATTCTTCACTTCATCAAGAGAAAAAGGCCGACTTGCCTGATCCTAAGCCTGATCAGGGGAAAGTTATTCAAAGTGGAAATCATAAAGAACAAGTTCCTCAATTTCCAAATAACAAAAAGAAAGCACAGAATGATAAAAGCTCTTCTGGGACTGCAAGCATGTTAGCTAGTATGTGGGGTCGTGCGTCTGCAAAACCAAAGCCCGAGCCAGCTTCAGTAAAAGCTGATAACATTGTTCCTATTTCTAATGACGCTCAAGTGCGTGCTAATGAACTGGTAGAGGATGAAAGCAGTGACGATGATGCCCGGGAAATGAACTTTAAGAGAGGATCAAATGGTGAAGGGAATAATCGAAAGAGGCGTGTGGTCCTTGATGACTCTGATGAAGATGATGATGATGGCAAATATGTAGTGAACCTAGCTTCACCAGATCCTCCGAAAAAGCAAGTACCTGTTGATTTAAAGAAAAGTTCTAGAACTTCAGATTTGGAAAATAAGAGTTTGGTTTCTGATGAACCAAAAGAAGATAAAGCGAAGGTTAAGAAAGAAAAGGCGTCCGAGAAAGAAGATATCAACGTCAGGAAAATGGAGAATCCGGATTCAAACGAGAACAAATGTCCTGAAAAGAATGATGCTATGAAAGATAAAGCGGGTGATGCTGCTCAAAATGCGCTTAAAAAGAGAAAAGTTTTGAAGACACGGATCGATGAGCGTGGGAGAGAAGTAACTGAGGTGGTTTGGGAGGACGCTGAGAAAGAAACGAAGCCTGAGGATAATACAAGAAAAGATAAATGTGACACTAATACTGCAAACAATGTTGTCAACAGGCCCCCCGCAGCAGCTCCTAAAAAGTCACCTGCGGTAGGTAATGCCCTGTCACATGCAGCAGGCAAAGCAGGAAACAAGAAAGCCGCTGCTAAGGATCCTAAACAGGGGAATATCATGTCATTCTTCAAGAAGAAGGTTTAA 1509 42.01 MGDIETLGILDEIQSLISDKLQVVSYKWLSRNFLVPSNTAKRLLQEFVEKNGSQLKVIYSLSGWLKNNPEAYHVKLVLGSKLSEAKGDFGDGCSVQVYSVQASVPKDPAVLWNAEFIQSEELFKEPPNVDNCLRDNRFCGVSNSFVKRNTEGTPGTSTGPSLKNVGIPGPSRSNISNQTSNSSLHQEKKADLPDPKPDQGKVIQSGNHKEQVPQFPNNKKKAQNDKSSSGTASMLASMWGRASAKPKPEPASVKADNIVPISNDAQVRANELVEDESSDDDAREMNFKRGSNGEGNNRKRRVVLDDSDEDDDDGKYVVNLASPDPPKKQVPVDLKKSSRTSDLENKSLVSDEPKEDKAKVKKEKASEKEDINVRKMENPDSNENKCPEKNDAMKDKAGDAAQNALKKRKVLKTRIDERGREVTEVVWEDAEKETKPEDNTRKDKCDTNTANNVVNRPPAAAPKKSPAVGNALSHAAGKAGNKKAAAKDPKQGNIMSFFKKKV* 503
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11535 502 MobiDBLite consensus disorder prediction 204 236 - -
Artr3g11535 502 MobiDBLite consensus disorder prediction 428 445 - -
Artr3g11535 502 Pfam DNA polymerase subunit Cdc27 23 501 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Artr3g11535 502 FunFam DNA polymerase delta subunit 7 149 - -
Artr3g11535 502 MobiDBLite consensus disorder prediction 145 405 - -
Artr3g11535 502 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 501 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(PANTHER)|GO:0043625(InterPro)|GO:1904161(PANTHER)
Artr3g11535 502 MobiDBLite consensus disorder prediction 329 405 - -
Artr3g11535 502 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 147 IPR041913 -
Artr3g11535 502 MobiDBLite consensus disorder prediction 145 186 - -
Artr3g11535 502 MobiDBLite consensus disorder prediction 428 502 - -
Artr3g11535 502 MobiDBLite consensus disorder prediction 281 306 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11535 K03504 DNA polymerase delta subunit 3