Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g11536 | ATGTCTCGTCACATATACATCCCAATATTAATATCTACTTTACTTTCATTTACTTCCGCTAGAACTGTATTTAATGAGTCAACGCCAATATTGTTGCTACCATCATCATCATCATCTGTTGTTGTTGGTGAAATGAGTGGCGCGTGTCCATCACCTGATTCTAGACTCAACTACCGTCCGATAATTGGGATAGTGAGTCATCCAGGTGATGGTGCATCGGGTAGGCTTAGTAATGCTACCAATGCCTCGTATATTGCGGCTTCCTATGTTAAGTTTGTGGAGTCTGCTGGTGCTAGAGTTATTCCGATTATTTATAATGAACCAATGGAGATTATACAAACAGTAATTTCTTCTATGATAAATCTACTTGGCAGTCATTTATTGGTTTGTGAAAAAAAACTCAATTTAGTCAACGGAGTGCTTTTTACAGGTGGATGGTCTAAGACTGGCCTCTACTTTGATGTCATTGAGGAAGTTTTTAATCAAGTCCTGAAGAAGAATGACGCTGGTGAACATTTTCCGTTGCTTGCTATATGCTTAGGTTTTGAACTCGTAACAATGATTGTTAGCAAAAACAATAACATCCTTGAAGCCTTTAGTGCATCAGATCAAGCATCCACACTGCAATTCATAGATAACATTAATATTGAAGAAACTTTGTTTCAAAGATTTCCTCCCGAGTTGGTTGCCAAGTTGAGCACAGAATGCCTTGTGATGCAAAACCATAAATACGGAATATCGCCTGAAACATTTCAAAAGACCAAGGAACTATGCAGTTTCTTTAAGGTCTTAACAACTAGTACCGACGAAAATAACAAGGTATATGTATCAACAGCTCAATCCGAGAGGTATCCCGTGACTGCTGTCCAGTGGCATCCAGAGAAAAATGCTTTTGAGTGGGGCTCGTCGGTGATTCCACATTCAGATAATGCAATTCAGGTGACTCAACATGTTGCAAACTATTTCGTGAGCGAGGCTAGGAAATCCTTCAACAGACCACCTAATGACGAAGTGCTAAGAAACCTTATTTACAATTACAGCCCCACTTATTGTGGGACGGCTGGGAAAGGATACGATGAGGTTTATATCTTCAACGAGAATGAAAAGATGGCTCGACTTTAA | 1122 | 39.57 | MSRHIYIPILISTLLSFTSARTVFNESTPILLLPSSSSSVVVGEMSGACPSPDSRLNYRPIIGIVSHPGDGASGRLSNATNASYIAASYVKFVESAGARVIPIIYNEPMEIIQTVISSMINLLGSHLLVCEKKLNLVNGVLFTGGWSKTGLYFDVIEEVFNQVLKKNDAGEHFPLLAICLGFELVTMIVSKNNNILEAFSASDQASTLQFIDNINIEETLFQRFPPELVAKLSTECLVMQNHKYGISPETFQKTKELCSFFKVLTTSTDENNKVYVSTAQSERYPVTAVQWHPEKNAFEWGSSVIPHSDNAIQVTQHVANYFVSEARKSFNRPPNDEVLRNLIYNYSPTYCGTAGKGYDEVYIFNENEKMARL* | 374 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g11536 | 373 | Gene3D | - | 56 | 365 | IPR029062 | - | |
| Artr3g11536 | 373 | ProSiteProfiles | Gamma-glutamyl hydrolase domain profile. | 51 | 365 | IPR015527 | GO:0008242(InterPro) | |
| Artr3g11536 | 373 | Pfam | Peptidase C26 | 60 | 294 | IPR011697 | GO:0016787(InterPro) | |
| Artr3g11536 | 373 | FunFam | Folate gamma-glutamyl hydrolase | 125 | 365 | - | - | |
| Artr3g11536 | 373 | PANTHER | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE | 32 | 365 | IPR015527 | GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER) | |
| Artr3g11536 | 373 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 101 | 332 | - | - | |
| Artr3g11536 | 373 | SUPERFAMILY | Class I glutamine amidotransferase-like | 81 | 364 | IPR029062 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g11536 | K01307 | gamma-glutamyl hydrolase [EC:3.4.19.9] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr1:52602507 | Artr3g11536 | Artr-Chr3:390350369 | dispersed |