Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g11568 | ATGAGGTGCAATGCGTGCTGGCGGGAGCTGGAAGGACGGGCTATAACTACCACATGTGGCCATCTCTTATGCAATGAAGATGCCAGTAAGATATTAAGCAACGATGCAGCTTGCCCTATTTGTGATCAAGTACTTTCTAAAAGTCTTATGAAACCTGTGGATACAAACCCAAGTGACGAATGGGTTAATATGGCTATGACTGGATTATCTCCACAGCTACTAATGAAGAGTGCATATAGAAGCGTCATGTTCACCATTGGACAGAAGGAACTAGAAATGCAATTCAAGATGAACAGGATAGTAGCTCAGTGCCGGCAGAAATGTGAGGCGCTGCAAGAAAAGTTCACAGAAAAAATGGAGCAGGTGCATACCGCATATCAGAAAATGGGCAAAAGGTGCCAGATGATGGAACAAGAAATTGAAAACTTGTCTAAAGATAAGCAGGAGCTCCAAGAAAAATATTCTGAAAAGTCCAGGCAGAAGAGAAAACTGGACGAGATGTATGACCAATTGAGAAGTGAGTATGAGTCGGTCAAACGGTCAGCCATTCAACCTGCAAACAACTTCTTCTCAAGGGCAGAACCTGATTTGTTTCCCAGTCCAGCCAACATGATGGATAACAGAGATACCACAAGGAAAGATTGGTCGGTTTTCACCCCTGATACTCCAGGACCTCGTGAAGATATATGGCCACACACAACTAGACAGAACAGTTCGAACTCTGGGCCATTCGACATCACCAATAGCCCACCTGCTAAACATTCAGCAATCCCAGTTGAAAGCAGAAGACCAGCTGGTCGTCCAATGTTTGGAGGTGGAGGTGGAGGTGGAGGTGGTGGTGGTGGAGCAAGCAATCCTTCTATGACCCTAAGAAATCTTATATTATCACCAATGAAGAAGCCTCAACTCTCACGTAGCAGACCTCAACTGTTCACGTTGTAG | 942 | 44.9 | MRCNACWRELEGRAITTTCGHLLCNEDASKILSNDAACPICDQVLSKSLMKPVDTNPSDEWVNMAMTGLSPQLLMKSAYRSVMFTIGQKELEMQFKMNRIVAQCRQKCEALQEKFTEKMEQVHTAYQKMGKRCQMMEQEIENLSKDKQELQEKYSEKSRQKRKLDEMYDQLRSEYESVKRSAIQPANNFFSRAEPDLFPSPANMMDNRDTTRKDWSVFTPDTPGPREDIWPHTTRQNSSNSGPFDITNSPPAKHSAIPVESRRPAGRPMFGGGGGGGGGGGGASNPSMTLRNLILSPMKKPQLSRSRPQLFTL* | 314 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g11568 | 313 | ProSiteProfiles | Zinc finger RING-type profile. | 3 | 42 | IPR001841 | - | |
| Artr3g11568 | 313 | Pfam | zinc-RING finger domain | 2 | 43 | IPR001841 | - | |
| Artr3g11568 | 313 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG | 1 | 313 | - | GO:0051026(PANTHER) | |
| Artr3g11568 | 313 | FunFam | E3 ubiquitin-protein ligase CCNB1IP1 homolog | 1 | 53 | - | - | |
| Artr3g11568 | 313 | Coils | Coil | 126 | 181 | - | - | |
| Artr3g11568 | 313 | MobiDBLite | consensus disorder prediction | 231 | 248 | - | - | |
| Artr3g11568 | 313 | MobiDBLite | consensus disorder prediction | 213 | 289 | - | - | |
| Artr3g11568 | 313 | Coils | Coil | 101 | 121 | - | - | |
| Artr3g11568 | 313 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 1 | 67 | IPR013083 | - | |
| Artr3g11568 | 313 | SUPERFAMILY | RING-U-box | 2 | 50 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g11568 | K10639 | E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr3:391514421 | Artr6g08669 | Artr-Chr6:297256022 | dispersed |