AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11793 ATGCACAAAACAGCACAATCATGGTTCACAGGAGGCCCAAGCCAATCAAACAGCGATCTGAATAAAAAACCACCTTCACTACTTGCTGATTGGAACGCGTACGCTGCATCATCTTCACAAGCTGATACTCAAGATCTGGATTTAGGGTTTGATATTGAATCTGCTGTTAGGACTAAGGTTTCCGGTACTTTTAATGTAGTTTCAAAGGGAGTGAGGGACATACCTGGTAGTTTGCAGTCGGCAACAAGCAATGTCTCAACTGGAAAGTCTTTCATGACGTTTGGTATACTTCTTGCTGTTGGGGTGTTCCTAGTCTTTATTGCGGTCACTGTATTTCTACCAGTCATGGTGTTTGCGCCTCAGAAGTTTGCTATATGTTTCACAATTGGTTGTGCCCTCATAATTGCTTCATTTTTTGCTCTAAAAGGTTATAGAACTCAGTTTGCACACATGACATCTAAAGAGAGACTTCCTATTACATTGGGCTTTATTGGCAGCATGCTCGGTACCATTTATGTTTCAATGGTCCTTCACAGTTATGTTCTTTCGGTGTTTTTCTCAATTTTACAGGTTGTTTCATTGTCATATTACGCAATTTCATACTTTCCTGGAGGATCGGCTGGCGTGAAGTTCTTCACTTCTGCTCTTACTTCTTCGATTATGGGTTGCTTTGGGAGATGA 681 41.26 MHKTAQSWFTGGPSQSNSDLNKKPPSLLADWNAYAASSSQADTQDLDLGFDIESAVRTKVSGTFNVVSKGVRDIPGSLQSATSNVSTGKSFMTFGILLAVGVFLVFIAVTVFLPVMVFAPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMLGTIYVSMVLHSYVLSVFFSILQVVSLSYYAISYFPGGSAGVKFFTSALTSSIMGCFGR* 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11793 226 MobiDBLite consensus disorder prediction 1 21 - -
Artr3g11793 226 PANTHER UNCHARACTERIZED 1 218 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Artr3g11793 226 Pfam Got1-Sft2-like family 92 203 IPR007305 GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11793 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr2:94464900 Artr3g11793 Artr-Chr3:403773673 dispersed