AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11813 ATGTCATCCCAACCACCAATTGAAAACAACTCAAACACCAAATCCGAACAAGAAACAACCACACTCGCCTTCCACAAAAAACGAGCTCGTCGAGTCAGTTTCGCCGAAAACACATCCGTACACATCTTCAACCGCGACGAAGACTCCGGTACTCCCGTAAACGCGAAGCAACCACCGTCTCATGAGAATGAGTATTCTGATGAGCCTAAGTTTTGGAATAATGATGAGGACGGGGAGGAGGATGAGGATGAGGATGAGGATATGGAGGATGAGATGGATGAATCTGGTGGCTCGAGAAGTCCGTTTTTGCGATTGGTTGGGTCGTCTCCGTCGTCCGGTGGGAGTACTTTTGGTTCGGCTACCTCAAATGATGAAGATAATTTTTTTGGTCCTGTATCGGCAAACTTCATTAGACGAGATATACTGGACCGTGAAGCTTCTGACGGAAATCATGATCAGACTATGGATTCAACAGCCTTTTCGATGCATTTTCGTAGCATTGCTAGGTCAGACTCAGAAGTGGAGTTGAAGACCTCAACAGGGGTTCACCTTTCCTTTGAGGAGAAAACCCCAAATCAAGATTCTAATCCCACACATACAGGAAGCTTAATGCTTATGACACAAGCTAAGAAGCCAAATCATCAACCTTCGGTTTCTACCTCCAAACTACGCACTTCATCCGAGTCTAATGATATGAGTATTGTTGGAGAATATCGTTATAAATATGACTATGGAGAACTATCTCCTACATTGGATGCACTCTTGGCTGAAGGCAATAAGGATTTGCGTGTGATCGCTGCTTCTAAAGATACTATTCTGAAATCACCAAGAATGGTTGCAACAACCAAAGAGTATGGGGCTAACCTCATGGATTTTAGTTGTGGTGAAGATAATAATAATCTAGAAGGGATTATTACTCATGAAATGGTCAATGATGATGTTGCCCCTAATCATAATCAGCTTGGTGTGGTCAATGACGGATCAAATATATCTTCCAATAAGGAGATGCCTTTAGATGTCTTATCTGAGGCTGAGAAACATTTGTCCTCTGGTTCTTCTATTTTGGTTACCCCAAATGCTAAGACAACAGATCTTGTCAAAGATACAGTTCAGAGAAAGTCAAGCCTGGACTTCATGGCTACCAGTCAAAGCAATACTAATCAACATCAACCACCTTTTGTAGGGGCAGTGAACTCTTTGAATGATAAGTCTAGTCACATGCATTTCGATGGTGTCAGTCCATCTAAATTACCATCTACTGCGACTCCTCTTCATAATTATTCAAGTGTTTTTGTAAGAACAGATACTCCGAAACATAGTCGGAGTGTTTTATCCATGCAGAAAAGCATTTCTAAACTCAAAATGCTAAACGCTTCTCCCTTTTCTGCTGATCTGACTGCTAAACTTGAAGATTCAGCTTCCCGATCTGTACACAGCCCCTCTAAGATGACTCCTTCTAATACTTCGTTGGAGAAAAACCATAAAGCTTCTTTACTCAATTATATGGATGATAGTGGACAATTATCATCTGCTGTTCAGAAGAAGAGAGAAAGAGCAAGTTCAACAACTATGGATGATGTTAGGTTACAGACACCAAAGAATGCTGTCCCTGTAACTCATATGCAAAATGTTGCCAAACTTGCATCACCTTTATTGATACCACCTGAAAGCGCATTGTCTGGAGAAAAGTTGCAGGCAGAACTCTTGTCATCGGCAGATATCCGAAATGGTTATGAATATGATAAAGACAAATTTAATTTACCTCAAAGTTTTGGCTATTCTCCACAGAAGAAGTTAAAGATTGTGAATACATCAGAATTCAGAAGCAGTCCTCTAAGAGATGCAAAGCAATTTGCCAAACACAATGAACCGGGGGAAAGCGTTACTAATGCAAGTCTTTCTGCTATTGCTGCTGACAAGACCGATGTCTTGTGCATTGAGACGTTAGAAATAGATAGTTCGGAAATGTCCACTGAAGAAGAAATGGTGGATATCAGAGAGGTTTCTCTCAATGAGGCCCGTGGTAACTTAGAAACAAAGGAGAATGCTACAACCGTATTGAAGGATGATCAACATGCGCAGATTCAACCTAAGTTTATGGAAAGTGATATTGCCAGGGGAGAGTCCAGACGAGCTTCCCCGGTTTTGGAAGAAAAGACAGATAAACAATCTTGTCAGAAGAATTTGCATGGTGAGTTTTGTCAAAGCCCCTCAAATAAACAGTCATATGATGCGAACGTTGATTTCATACCCGCGGAAAATGTACCGTCGCCAAGTCCTCATCGCTTATCGAATGGAGATATAATCTCTGAGCAGGGAAGAAAGACTATATTCGGGGTGGTTGAGAGAACTGCTAGTACTCAGAGGAGTCCAAATATCACAAAAAGTCTTGTTGGCACCAAAGTCTCAAGTGACAATGAGATATCAATGATTGTACACACTTTTATAAATCCAACTGAGATGACTGCTATGCTCTCTAGAGAAACGAAAGAACTTATACCTCAATCAGCTGATAAGTTCAACTTGCATGCGATTGATTGTCTGACAAGCATCATAGATCAGCTTCTGAAGGCAAAAACATATCAGCTTCTTTCTGATGAAATCAAATCTCAGAAAAGTGTAGATGCCAGTAAATACATTGCGCACAAAAGAGCAGCAGAGATGAAACTACTTGTGTGCAGATTAGTGCATGAGAAAGCAAAGTTGCAGCTACTGAATGTGAAGCAGGAGAGGTTACTGGAAAGGGTAGAATCAGTTTCCTCCGGTATATTGGAGTCCGAGGAATTAAGGTTGATTTTTCCACCACAACAATCTTCACTTGTCCATTGCAAGTCCTTGTCAGTCAACATGAACAACCATCATGAGAGCCAGATTGACAGTGACAAAGTGACATCAATGGAGCAAACAGTTGATCACATCGATAGAAGAATTGCAAACTTGACCAAATCATTTCACAAGTCATGTAAGATGAAGGGAGAACCCAGCGCCCATGACACTATTGCATTTGTTAATGATTACGTGAAGAAGCGAGCATGCTGCCATATAATACGAAAGGATCTACAGCTTTGGTCTGTAGACAATTTTGAGGTGGGAAATGGTTGCCACAATGTTAATCTCAACTACCTCGACCTGATAACTCAAAGGTTAACAGTCAAAACTGGTCCTGTATCAAGCATTTCTGTTTCACACGAGTTACATAAAGCGAACATCAGCAAGATCTTCAGTGACATGGATGCTTGTGCTGCATTTGAATTTGTCTTTTATGCTGGAATGATGCAGAAGCATGCCGATGCTACAAGCTTAGCTCAAGCAACTCAAGTGACTGGTTCTCGTTTAGGCAGTTTGTTAGATGTGTTGGAAGAGATACAACATGCAAGAATAGAGCCAAAGAACTTGATTTCTGCAAGATTTCACACACCCAAAGCTGAGCAACTTGACCTTGAACTCTGCTTTTTTGATTCAACACATCGTAGGAAGGCAACAGTTACATTAGACGCATCATGTTTAGCAAGGGGCATCTATCCATCAGAAATTGTACCGTATCAGGTTGACATTCCTATTGATGAGCCACAAAGCTCTTCTCCGTCGCTTTCAGCTGAGATTGCATCAGCATTTCAAGATCTTAAAGTGGGATATTTAAGGATTCAACGGTTGTGTACATGCATTTCCAAGTTAATCGGCCCTCCAAGCAGATAA 3696 41.21 MSSQPPIENNSNTKSEQETTTLAFHKKRARRVSFAENTSVHIFNRDEDSGTPVNAKQPPSHENEYSDEPKFWNNDEDGEEDEDEDEDMEDEMDESGGSRSPFLRLVGSSPSSGGSTFGSATSNDEDNFFGPVSANFIRRDILDREASDGNHDQTMDSTAFSMHFRSIARSDSEVELKTSTGVHLSFEEKTPNQDSNPTHTGSLMLMTQAKKPNHQPSVSTSKLRTSSESNDMSIVGEYRYKYDYGELSPTLDALLAEGNKDLRVIAASKDTILKSPRMVATTKEYGANLMDFSCGEDNNNLEGIITHEMVNDDVAPNHNQLGVVNDGSNISSNKEMPLDVLSEAEKHLSSGSSILVTPNAKTTDLVKDTVQRKSSLDFMATSQSNTNQHQPPFVGAVNSLNDKSSHMHFDGVSPSKLPSTATPLHNYSSVFVRTDTPKHSRSVLSMQKSISKLKMLNASPFSADLTAKLEDSASRSVHSPSKMTPSNTSLEKNHKASLLNYMDDSGQLSSAVQKKRERASSTTMDDVRLQTPKNAVPVTHMQNVAKLASPLLIPPESALSGEKLQAELLSSADIRNGYEYDKDKFNLPQSFGYSPQKKLKIVNTSEFRSSPLRDAKQFAKHNEPGESVTNASLSAIAADKTDVLCIETLEIDSSEMSTEEEMVDIREVSLNEARGNLETKENATTVLKDDQHAQIQPKFMESDIARGESRRASPVLEEKTDKQSCQKNLHGEFCQSPSNKQSYDANVDFIPAENVPSPSPHRLSNGDIISEQGRKTIFGVVERTASTQRSPNITKSLVGTKVSSDNEISMIVHTFINPTEMTAMLSRETKELIPQSADKFNLHAIDCLTSIIDQLLKAKTYQLLSDEIKSQKSVDASKYIAHKRAAEMKLLVCRLVHEKAKLQLLNVKQERLLERVESVSSGILESEELRLIFPPQQSSLVHCKSLSVNMNNHHESQIDSDKVTSMEQTVDHIDRRIANLTKSFHKSCKMKGEPSAHDTIAFVNDYVKKRACCHIIRKDLQLWSVDNFEVGNGCHNVNLNYLDLITQRLTVKTGPVSSISVSHELHKANISKIFSDMDACAAFEFVFYAGMMQKHADATSLAQATQVTGSRLGSLLDVLEEIQHARIEPKNLISARFHTPKAEQLDLELCFFDSTHRRKATVTLDASCLARGIYPSEIVPYQVDIPIDEPQSSSPSLSAEIASAFQDLKVGYLRIQRLCTCISKLIGPPSR* 1232
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11813 1231 MobiDBLite consensus disorder prediction 705 724 - -
Artr3g11813 1231 PANTHER OS06G0608100 PROTEIN 4 1226 - -
Artr3g11813 1231 Pfam Knl1 RWD C-terminal domain 966 1118 IPR040850 -
Artr3g11813 1231 MobiDBLite consensus disorder prediction 102 128 - -
Artr3g11813 1231 MobiDBLite consensus disorder prediction 73 93 - -
Artr3g11813 1231 MobiDBLite consensus disorder prediction 1 128 - -
Artr3g11813 1231 MobiDBLite consensus disorder prediction 208 228 - -
Artr3g11813 1231 MobiDBLite consensus disorder prediction 20 34 - -
Artr3g11813 1231 MobiDBLite consensus disorder prediction 1 19 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11813 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr2:99721547 Artr3g11813 Artr-Chr3:404591347 dispersed