Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g11836 | ATGAAGGCTTTAAGATTTGGGGTTTATTGTGATCCCATAAACCCTCCTTCAACTTTCAAATCTTCATCATCATCAGCAATCTTAATGGATGGTCGCAAAAACAATCTTGCTTGTATTCGAGCTCAACAGTCTAAGACGAAAGACGTGCCTATAATTACTACTTCATCCAATGTATCCCTAATTGAAGAACTGAAAAGTAAAGATTGGGAAATTGGAGTTTTAAAAGATGAAATAGCTGCAACTCAGGGAATTCGAATAAGAAGACGACCTCCAACAGGACCTCCTTTGCATTATGTTGGTCCTTTGGAGCTCCTTTTACAGAATGAAGGGAATACTCCCCGTAACATACTTGAAGAAATTGTATGGAACAAAGATGTAGAGGTTACCCAGATGAAAGAGAGATATCCGCTATTTTCGCTAAAAGAGGCTCTCAACAGTGCTCCTCCTTCAAGGGACTTTGTAGGAGCTCTCAAGGCGTCATATTTGCGAACTGGAGTGCCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCACCGAGTAGAGGAGTTCTAAGGGAAGATTTTCACCCTGTTGAAGTTGCAAAAGCATATGAGAAAGGTGGAGCAGCATGCCTCAGTGTTTTGACCGATTCAAAATATTTTCAGGGGAGCTTCGAGAATCTAGAGGCTATACGGAATGCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGAGTTCATTGTGGATGCATGGCAGCTGTATTATGGGCGAGCAAAGGGTGCAGATGCTGTTTTGTTAATTGCAGGCGTCTTACCAGATCTTGACATCAAATACATGCTTAAGATTTGCAAAATGATTGGACTGACAGCACTTGTTGAGGTACATGATGAGAACGAAATGGATCGCATGCTGGCAATTGATGGCATTGAACTCATTGGCATCAACAACCGTAACCTTGAAACATTTGAAGTTGATATTAGTAACACAAAGAAGTTGCTTGAAGGGGAGCGTGGGGAGAAGATCAGACAGAAGGACATAATAGTGGTCGGGGAGTCTGGACTGTTTACTCCTGCAGATATTGCTTATGTACTAGAAGCTGGCGTGAAAGCTATATTGGTCGGGGAGTCAATTGTGAAGCAGAAAGATCCGACACAAGGAATTAGAGAACTTTTTGGAAAAGATATATCAGCTTAG | 1167 | 41.82 | MKALRFGVYCDPINPPSTFKSSSSSAILMDGRKNNLACIRAQQSKTKDVPIITTSSNVSLIEELKSKDWEIGVLKDEIAATQGIRIRRRPPTGPPLHYVGPLELLLQNEGNTPRNILEEIVWNKDVEVTQMKERYPLFSLKEALNSAPPSRDFVGALKASYLRTGVPGLIAEVKKASPSRGVLREDFHPVEVAKAYEKGGAACLSVLTDSKYFQGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYGRAKGADAVLLIAGVLPDLDIKYMLKICKMIGLTALVEVHDENEMDRMLAIDGIELIGINNRNLETFEVDISNTKKLLEGERGEKIRQKDIIVVGESGLFTPADIAYVLEAGVKAILVGESIVKQKDPTQGIRELFGKDISA* | 389 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g11836 | 388 | Gene3D | Aldolase class I | 109 | 387 | IPR013785 | - | |
| Artr3g11836 | 388 | SUPERFAMILY | Ribulose-phoshate binding barrel | 124 | 383 | IPR011060 | - | |
| Artr3g11836 | 388 | Pfam | Indole-3-glycerol phosphate synthase | 117 | 381 | IPR013798 | GO:0004425(InterPro) | |
| Artr3g11836 | 388 | CDD | IGPS | 153 | 381 | IPR013798 | GO:0004425(InterPro) | |
| Artr3g11836 | 388 | FunFam | Indole-3-glycerol phosphate synthase chloroplastic | 109 | 387 | - | - | |
| Artr3g11836 | 388 | Hamap | Indole-3-glycerol phosphate synthase [trpC]. | 115 | 383 | IPR013798 | GO:0004425(InterPro) | |
| Artr3g11836 | 388 | ProSitePatterns | Indole-3-glycerol phosphate synthase signature. | 169 | 187 | IPR001468 | GO:0004425(InterPro)|GO:0006568(InterPro) | |
| Artr3g11836 | 388 | PANTHER | TRYPTOPHAN BIOSYNTHESIS PROTEIN | 60 | 384 | IPR045186 | GO:0000162(PANTHER)|GO:0004425(PANTHER)|GO:0004425(InterPro)|GO:0004640(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g11836 | K01609 | indole-3-glycerol phosphate synthase [EC:4.1.1.48] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr2:154819627 | Artr3g11836 | Artr-Chr3:405419220 | dispersed |