AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g11973 ATGCTCCTATCACCAGGCCACTCCCCACGGGGTCTATCCACCCCATCTCCGTCACCAGCACCGTCATCTTCTCACACACCATCTCTTAACGCCGTTAATTCAAACTCTCAAAACCCTAGAAAACGAAACTCATCAACAGTGCTTGATGAAGACACATATGTAGCAGCAATTGAGAAAATAATCGAACGTGATTACTTTCCTGACATTCCTAAGCTTCGTGACCGGTTGGATTTGCTCGAAGCGTCTCGAACAGGCGATCCGATGCTTATTCGTGACGCGCAGTTGAAGATTATCGAACGGCGGTCCGGGAAAACTGCGAATAATGATACGGCAGGTAAATTTCGCACGCCTGGGTCCACTTTTTTTAGAAATAGTGTCTCCTTAGGGTTTGATCAAACACCTGTTGAAAACGTAAATGTCGATAATGAGAAGAGTTCAGTTGATGAGAATGCTGATAATATGGATGAGTTAACGTTAGACGCCTTTTTTAGACGGTATACGAGTGAGGATAATGAGAGTTTTAGTAAACTGATTGAGAAGGTTAATAAGAGGAAGAGGGAGAGGTATGGGTTTTTGTTGGATGGGGAGAATCGTGGGACGGGTGGTTTGATTGAGGATGTGAAGAAGGATAGGATTACGGATGGGTATGGGACGTCGGATCAGCCTTTGGCGACTTTGGAGAGCTGGAAGTATACTGCAAAGAATTTGTTGATGTATCATCCGGCGGATAGAGGTGAGGTAGCGTTGACGAATGATGAATTGGCGAATAGGATTAATGGGATGACTAAGGAGATTAGTAAGACGAATACGAGGTTTCATGGGAAGGTAAGTGATTATAGGGGTAGAGAGGATGATGAGGTTTCGGTGCTTTATAATCCGGTTGCTGGTGGGACGCCTGTTCCTTGGTCTTTGTCGGATAGGGATGGGGATAAGATGAAGAAGTATGATTTGGAGGAAATGAAGAAGACGCCTAATCCGTTTTATGTTGAGTCGAATAAGAAAGCGGATAACGGATATAGTTTTGTGAAGACGCCGTCGCCTGCACCAGGTGTGGATGAGTCGCCGTTTATAACGTGGGGTGAGATTGAAGGGACGCCGTTGAGATTAGAAGATGAAGATACTCCTATTGATATTGGTGGTAGTGGAAACGGGCCTCATTTTAATATCCCTCTTCCACCTTCACGGGATTTAAAGGCTCATTCTTTGTCAAGAGACGCTTCTCGGAAACTGAGGGATCGGTCTTTGATGTTTCAGAAACCGCCATTGCATTCCCCAGCTAGAAGTGGTAGTGCTAGTCCAAGTGCGCGGACACTTTCACCTGCTGCACAGAAGTTTGTTAGAAATGCTATTGCCAAGTCTTCTCGTTCGGCTACTGTTGATGAATCGCTTCGTGCAAGTTATCGTGGGTCGAGTCCTGGATTAGCTACACCAAAACCTGGAAGGAGTACATCGAGGTTGGCAAGAGATGGTAGCGTGAGTTTGAGGTCACCGTCTGTAGGGGAGGGCTCTAATCCTCCTTGGTAA 1524 45.93 MLLSPGHSPRGLSTPSPSPAPSSSHTPSLNAVNSNSQNPRKRNSSTVLDEDTYVAAIEKIIERDYFPDIPKLRDRLDLLEASRTGDPMLIRDAQLKIIERRSGKTANNDTAGKFRTPGSTFFRNSVSLGFDQTPVENVNVDNEKSSVDENADNMDELTLDAFFRRYTSEDNESFSKLIEKVNKRKRERYGFLLDGENRGTGGLIEDVKKDRITDGYGTSDQPLATLESWKYTAKNLLMYHPADRGEVALTNDELANRINGMTKEISKTNTRFHGKVSDYRGREDDEVSVLYNPVAGGTPVPWSLSDRDGDKMKKYDLEEMKKTPNPFYVESNKKADNGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLEDEDTPIDIGGSGNGPHFNIPLPPSRDLKAHSLSRDASRKLRDRSLMFQKPPLHSPARSGSASPSARTLSPAAQKFVRNAIAKSSRSATVDESLRASYRGSSPGLATPKPGRSTSRLARDGSVSLRSPSVGEGSNPPW* 508
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g11973 507 Coils Coil 251 271 - -
Artr3g11973 507 MobiDBLite consensus disorder prediction 449 465 - -
Artr3g11973 507 MobiDBLite consensus disorder prediction 398 416 - -
Artr3g11973 507 MobiDBLite consensus disorder prediction 425 441 - -
Artr3g11973 507 MobiDBLite consensus disorder prediction 486 500 - -
Artr3g11973 507 Pfam Nuclear protein Es2 45 445 IPR019148 -
Artr3g11973 507 MobiDBLite consensus disorder prediction 1 47 - -
Artr3g11973 507 MobiDBLite consensus disorder prediction 23 43 - -
Artr3g11973 507 MobiDBLite consensus disorder prediction 377 507 - -
Artr3g11973 507 PANTHER ES-2 PROTEIN - RELATED 21 497 IPR019148 GO:0071013(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g11973 K13118 protein DGCR14