Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g11987 | ATGAGTAAAATCTTAGCTATTCTTTTTTGCTTCTTGTTAACAAATTTATCAGTCTCGTACGCTCAAAACTGTAATAATTATGCTTTTTCTAGTAACGCGGTATACGCGACTTGTGTCACGTTACCAGTTTTAAACTCACATCTTCATTGGAACTACCATACTAATGGTACAGTTGACGTGGCATTTCGTCACACAGGGTCCCCCACAAACCAATGGGTGGCATGGGCCTTAAATTTTGATCGGCCAGGTATGGTTGGTGCACAAGCACTTGTAGCATTAACAAGCTCAAACGGGTCGGTTCAAGCTTATACTAGTGCTGTAACAAGTTATAATACGGGTTTACAACGGAGTTCTTTAAGCTTTGATGTGCCTATGATTAGAAGTGAGAGAGTTAATGGAGATGTGGTTATTTATGCAACGTTGGTTTTGCCACGTGGAAGGACGAGATTTAATCAAGTGTGGCAAGTGGGTCCTGTTGCTAATGGAGCTCCGAGTATTCATGGGTTGGGTTCGGATAATAGGAACTCGATTGGGTCGGTTGACTTTAGTACTGGTCAAACTGCTGGTGGTGGTAATGTTGGTGGATCACGGATGCGAAGGAGGAATACTCATGGAGTATTAAACGCTGTTAGTTGGGGAGTATTGATGCCTATGGGAGCTATGACAGCAAGATATTTAAAGGTGTTTAAAGTAGCTAATCCAGCCTGGTTCTATATCCATGCTGCTTGCCAAACATCAGCCTATGCTGTAGGTGTAGCGGGATGGGCCACTGGACTCAAACTCGGCAGTGACTCAGCTGGAATCACTCACACGAGTCATCGCAACATTGGAATCATCCTCTTTACACTTGGAACACTTCAGGTTTTTGCTTTGCTGTTGAGGCCTAAGCCAGACAACAAGTACAGATTTTATTGGAACATATACCACCATGGCCTTGGATACTCGGTGATCATCTTGAGCATTATCAACGTCTACGAGGGACTTGATATCTTGGACCCTGAGAAGAAGTGGAAGGACGCGTACACCGGCATACTTATCTCTTTGGGGGTTATCACGGTTCTGTTAGAAGCTTTGACTTGGTTCATCGTTTTGAAGAGGAAGAAGGAAGACAAAAGGACACATGCAGGGACTAATGGTTCATATGGAGCCAATGGACTTGCGTAG | 1164 | 43.9 | MSKILAILFCFLLTNLSVSYAQNCNNYAFSSNAVYATCVTLPVLNSHLHWNYHTNGTVDVAFRHTGSPTNQWVAWALNFDRPGMVGAQALVALTSSNGSVQAYTSAVTSYNTGLQRSSLSFDVPMIRSERVNGDVVIYATLVLPRGRTRFNQVWQVGPVANGAPSIHGLGSDNRNSIGSVDFSTGQTAGGGNVGGSRMRRRNTHGVLNAVSWGVLMPMGAMTARYLKVFKVANPAWFYIHAACQTSAYAVGVAGWATGLKLGSDSAGITHTSHRNIGIILFTLGTLQVFALLLRPKPDNKYRFYWNIYHHGLGYSVIILSIINVYEGLDILDPEKKWKDAYTGILISLGVITVLLEALTWFIVLKRKKEDKRTHAGTNGSYGANGLA* | 388 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g11987 | 387 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Artr3g11987 | 387 | SMART | 561-7 | 203 | 328 | IPR006593 | - | |
| Artr3g11987 | 387 | CDD | Cyt-b561-FRRS1-like | 179 | 357 | - | - | |
| Artr3g11987 | 387 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Artr3g11987 | 387 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - | |
| Artr3g11987 | 387 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Artr3g11987 | 387 | PIRSF | UCP037471 | 1 | 385 | IPR017214 | - | |
| Artr3g11987 | 387 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Artr3g11987 | 387 | ProSiteProfiles | Cytochrome b561 domain profile. | 163 | 364 | IPR006593 | - | |
| Artr3g11987 | 387 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 5 | 368 | - | - | |
| Artr3g11987 | 387 | Gene3D | - | 182 | 374 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g11987 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 21921 | Artr1g02088 | Artr3g11987 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr2:238408068 | Artr3g11987 | Artr-Chr3:410492024 | dispersed | |
| Artr | Artr-Chr3:410492024 | Artr4g03453 | Artr-Chr4:109603336 | dispersed | |
| Artr | Artr-Chr2:152821699 | Artr3g11987 | Artr-Chr3:410492024 | transposed | |
| Artr | Artr-Chr1:60115114 | Artr3g11987 | Artr-Chr3:410492024 | wgd |