Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g12073 | ATGGAGCAGGAAAGAAATGATCATGAAATATCGGTTACTTGGAGAGGGAAGAAATATGTTGTGACTATGAATTTAAGTGCCACTTTAGAAGAATTGGGGCGTGAGTTACAGAAACTAACTGCAGTGAAAGCAGATACTTTGAAGCTCATTGTACAGTCCCGGAAAGCGTCTAAATTGTTGTCGCCTTTCTCTGATGAGCATTCTCGTCTCACTTTGCAGGAAACATCCATTGAGGGGAAACCTATACGGATGATGGGAGTGCCACAGGAAGAGGTTGATCAAGTTCTAAAAGGTGCTAAGACGGACATGAGGATTGCTGGATTTGATGAAGAGGAGAAGCGGATGAGACAAAGAATGTCAAATGGGTTTGATGCCCCATTGCAGCTTCCGTCTGGAAATTATGTTTTTGGTGGTTTTAAGACGCTCGAGCTTCCAGGGATTGAGTTGTATCCTCCACCGTCAGAAGCGTTGAGACTAATGCACACACTTGCTGCAGACAAAGGAATTGTCGCTATCATGAATAAGCATAAATGGCGTGTGGGAATCATGACTGAGATGGCTCCGGAGGGTTATGTCGGCGTAAGTCCCGTGTGCATCCTTGGTTTAAACAAGAATCAGGGCGAGGAGATATCTTTGCGTCTTCGAACTGATGATCTAAAGGGTTTCAGAAAATATCAGAGCATTAAAAAGACTCTTCTGCATGAACTTGCCCATATGGTATTCTCTGAACATGATGCGAAATTCTATGCTCTAGATAGTCAGCTTAACAAGGAGGCCGCTGCTCTAGACTGGACTAGATCTACTGGTCATACCTTAAGCGGGTCCCAGAAGACGCAACAATATGGATATGAGTTCCATGCTACTGATAATAGTAATAGTAGTAGTAGTTTGTCTCATAAACTTGGTGGAAGCCAATCGTCCAGCTCACTGGCTAATGCACGAGCATCTTCTGTTGCTGCTGCTTACCAGCGTTTAGTAATTGCATCCACCAACCCATCAACACCTGAATCACGTAAAGAACCCGACCCTGATGATTCTATGGATGTGACTATGAATAAGCCAGACGCTATTAACATTAGTGAAGAACAAACTTATGAACCTGACCCTGATGACCAGGAAGTGCTAAACAACAAAAACGAGCCCGACCCAGATGACAGTATAAACAGTGAAGCTATGGAATCTGAACCATGTGGAGAATCAACCGAAAAAACTTACGAACCTGACCCTGATGACCAGGAAGTGCTAAACAACAAAAACGAGCCCGACCCAGATGACAGTATAAACAGTGAAGCTATGGAATCTGAACCATGTGGAGAATCAACCGAAAACATTATTACTCCTGAGCTTAATCATGGTAAAACTGAAGAAAAAAATGAACCTGATCCTGATGATATAATCTTAGAGGATGAAGAACTGCAGAGGATTCAAGATCCTGTTATGATTGCTTGTAATCGTTTGAAGAAGTCCATTGAGACGCTGCAATCTGAAGTCAGTCCTGCAGAGGCTGCCATGGTTTTTCAGACTCTTGTTAAGATAGTCAAGAACGTTATTGAACACCCTAATGAAATAAAGTTCAAGAAATTACGCAAGGCTAATCCAGTAATCCAGAAGAACATTGCAAGTTATAATGCTGCAATGGAGATATTGTTCTTGATTGGTTTTTGTGAAGATGTTGTTCAAGATGAGATCGGGCGAGCGGAAGCTTATTTGGTGTTGAAGAGGAACGACCCAGGCTTGTTGTGGTTAGCAAAATCCTCTTTGGAGACATGCATTGCTTTCTAA | 1782 | 42.54 | MEQERNDHEISVTWRGKKYVVTMNLSATLEELGRELQKLTAVKADTLKLIVQSRKASKLLSPFSDEHSRLTLQETSIEGKPIRMMGVPQEEVDQVLKGAKTDMRIAGFDEEEKRMRQRMSNGFDAPLQLPSGNYVFGGFKTLELPGIELYPPPSEALRLMHTLAADKGIVAIMNKHKWRVGIMTEMAPEGYVGVSPVCILGLNKNQGEEISLRLRTDDLKGFRKYQSIKKTLLHELAHMVFSEHDAKFYALDSQLNKEAAALDWTRSTGHTLSGSQKTQQYGYEFHATDNSNSSSSLSHKLGGSQSSSSLANARASSVAAAYQRLVIASTNPSTPESRKEPDPDDSMDVTMNKPDAINISEEQTYEPDPDDQEVLNNKNEPDPDDSINSEAMESEPCGESTEKTYEPDPDDQEVLNNKNEPDPDDSINSEAMESEPCGESTENIITPELNHGKTEEKNEPDPDDIILEDEELQRIQDPVMIACNRLKKSIETLQSEVSPAEAAMVFQTLVKIVKNVIEHPNEIKFKKLRKANPVIQKNIASYNAAMEILFLIGFCEDVVQDEIGRAEAYLVLKRNDPGLLWLAKSSLETCIAF* | 594 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g12073 | 593 | CDD | PUB-WLM | 490 | 589 | - | - | |
| Artr3g12073 | 593 | MobiDBLite | consensus disorder prediction | 286 | 308 | - | - | |
| Artr3g12073 | 593 | Pfam | WLM domain | 148 | 325 | IPR013536 | - | |
| Artr3g12073 | 593 | PANTHER | ZINC METALLOPROTEINASE-LIKE PROTEIN | 1 | 435 | - | - | |
| Artr3g12073 | 593 | SMART | PGNneu | 504 | 573 | - | - | |
| Artr3g12073 | 593 | ProSiteProfiles | WLM domain profile. | 132 | 326 | IPR013536 | - | |
| Artr3g12073 | 593 | Gene3D | - | 3 | 92 | - | - | |
| Artr3g12073 | 593 | MobiDBLite | consensus disorder prediction | 371 | 385 | - | - | |
| Artr3g12073 | 593 | MobiDBLite | consensus disorder prediction | 396 | 425 | - | - | |
| Artr3g12073 | 593 | MobiDBLite | consensus disorder prediction | 433 | 448 | - | - | |
| Artr3g12073 | 593 | Gene3D | - | 486 | 587 | - | - | |
| Artr3g12073 | 593 | SUPERFAMILY | PUG domain-like | 479 | 591 | IPR036339 | - | |
| Artr3g12073 | 593 | MobiDBLite | consensus disorder prediction | 327 | 462 | - | - | |
| Artr3g12073 | 593 | Pfam | PUB domain | 505 | 578 | IPR018997 | - | |
| Artr3g12073 | 593 | SUPERFAMILY | Ubiquitin-like | 7 | 76 | IPR029071 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g12073 | K22685 | DNA-dependent metalloprotease WSS1 [EC:3.4.24.-] |