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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12080 ATGAGGAAGCTCTACAACCACAAGAAAACCAAAATCCACCCATCACCACAACCATCCACCACCACCACCACCACCATGACCAACCATCTACATCTACTACCACTCGCACTAGCCACACTCGCTGCCACCCTTCCACCACAAGATCAACAAGTCTTAGCATATCTTATCTCAACTAACAACGCAAAAACCGGCGGATATGGCGAGAACCACCCGCCACAATTCGGGTGCAACTGTTTTACTTGCTACACAAGTTACTGGGCTAAATGGGATGAGTCACCAAACCAACAACTGATTCATGATATTATTGAAAAGTATGAAGATGGGTTGGTTTGTAATAAGAAGAGCAAGAGAAAAACAAGGAGAAGTAAGGTTTTTCATGCAGACAGTGAAGCTCACGCGCCGGTGCATGCAGAGAGTGAGAGTCACGCGCCGCCGCAAGTTGAGGAAAATAAGGTTGACAATGATGAGGATGATGGATTCATGACGTCATTGCCGGAGAAAGGGTCAGTGAAAAAAATTGTTAACTTTTTAGTAGGAAGAATATGGGGTGTTTGGGGCATTTGA 564 45.21 MRKLYNHKKTKIHPSPQPSTTTTTTMTNHLHLLPLALATLAATLPPQDQQVLAYLISTNNAKTGGYGENHPPQFGCNCFTCYTSYWAKWDESPNQQLIHDIIEKYEDGLVCNKKSKRKTRRSKVFHADSEAHAPVHAESESHAPPQVEENKVDNDEDDGFMTSLPEKGSVKKIVNFLVGRIWGVWGI* 188
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12080 187 MobiDBLite consensus disorder prediction 120 163 - -
Artr3g12080 187 PANTHER F12F1.11-RELATED 1 186 - -
Artr3g12080 187 MobiDBLite consensus disorder prediction 1 23 - -
Artr3g12080 187 MobiDBLite consensus disorder prediction 123 162 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12080 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr2:152073220 Artr3g12080 Artr-Chr3:414395803 dispersed
Artr Artr-Chr3:3915245 Artr3g12080 Artr-Chr3:414395803 dispersed