AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12093 ATGAAGATACGTGACAGTGATCGTCATTTTTATCCCTTAACAAGTTTCCAGATCGGAGATTTGCAGTCTTATCTTTCAGATCTTACTCTTTATTTGGCGCCCGATAGCAAGACGTTCTATGTATTGGTGGATAATAGGCCATGGCTGGAAGATTTGCCATCGCGGCCTGCGCACCTATGGCAGTTAATGGTTACCAAGTCAAGGATGTCTCCTTTTGCAAACACTAGAGGGCGAAAGGGGAAGAACGAGCCGAGAGAGTTTGTCGACAAGAAGGACAGCTCTAAAGGTTTAAGCAAGTCTCAAAATTTGAAAAAATGGTTCTCGGTTGTTGATGCTGCAACATTGTCCAAAAAGAGGGCGTTGTTACCTGTAAAGAAACTTAGGACTTCGTTGCTAGCTAATAGCAAATTGCATAGAACTTTGTTTGGGTTTATTGTGTTTCAAGTGGCGTGGAAAGATGTTCGTGGTATGAATTACTTGAATGAGCTTCAGACTGACACGTCTCTTGCGATTGAGGCTAAATACATGAAGAGATGGGAATTTGATAGCATAGCTCAAGCAGCAAAATGCATAACTACATGGTTTCCGGGCACATCACGTGAACGATGTCTTTTGGAAGAGCACCTCGACTCTATGTTAGGAGATGTGTTCCATGATGCCCCTAAAGAGTTTCCAGACCACCAAAATACAAATCATGATGAAAATACCTCGATTACTAGTGTACAGAAGGAGAATGAATCTCCCTGCACTCCTCGTTGCAATCATGGGGATATACTAGAAACTTTAGTAGACCAAACAAATTGTAAAACAAATACAGTACATACACCTCCACCTGCTGGACCCTATAAAAGAAGAAAACTAACGAGTCCCACAGCACTTGATATCAAGCCTAATTTTTATGCCGAAGTAGCTCATGGTGGGGCCTTTTGCACACCAACTGCCTCTTCTTATGCAAGTGAGTGTGATGAAACAGCTGAAGCTACTGAATACAGGGATGTGTTGCTTATATTCCGGTTCAATGATCATGACCTCCCTTTTGAATTACAAAAGATAATAGTATCTGATTTGCGATTACTTACTTTATTAGAAGCTGGACTTCCGTCATGGGTAATTTTTTGTCAGTCTTACCCTGTATTTTGTCATATTTATCGTCCATGGATGGCTCTTCTGGCAAGAGTTCTATATGTGATAATTTCCATTGTTACGGTGGTCATTGGTTTCTATGATCTGTACAAAAACGTCCCCGTTCTTAAAGCAACTGCTTCTCGGTTATGTGGGCCACTTTTTGATTGGATAGAAACCTGGGAGATGGTATCGAGAATCAAGTATTTGGGAACTATGTTGTTTTTGCATAATTCTGAGAAGGCTGTTATGTGGTTCTTGATGATGACTCGCACTGTTCGATCATTTTTTTCGATTATCACACAGCCATTAGCTGGGCCGTTTGTTGAATTTTTGGAGGTTCTTTTTCCAGTTTGGAACTTAATTGTCGAAACGGGACAGTATTTGTGCTCGTTCGTTTGGATTCTAATGGAAACTTCATGGGATGTAGCTGAGAATCTGTTTGAAGTCGTCCTGCTTCCTGTCTGGTTTCTCTTGTCATTTATTTGGATGATTGTAAAAAGTGTTATGTACCCGATAATTTGGTGCCTTTGGGGGATACTCTATGCTCCGATTAGTCTCATACTTGGTTTATCCAGTTTTGTGGGATTTGTTTATAATGAAATATATGATTTGGCTAGAGACATATGGCTGTTTATGAGTGGTATCTTCAAGTTAGCTTCAAGTGCTGAGGCGACAGTGCATACATACGAGGTTTCTGTTTGGCGGTCTCTTTGGAATGACCTCTTCTCACAGGTTTTCCGCGCTGTTCGGAGTATTTTACACGGGTTTGTTGCATTCGTTGCAGCTTGTAATAGACACCGATTAAGCATATATAATCATTTACAGGAGCTCATTCGAACAGTCAATCAGCCATCCCAGAGGTCACAGTCTTTGAATCCTAGCCATGAATCACAGCCGTCGAAATCTAGCCATGGATCACAGAGATCTGGAAGTCAGATACCGGAAGAAGTTGGAGAACAAAAGCTCCGATCCAGAAGAAGCCTGAAGATGTAG 2118 41.36 MKIRDSDRHFYPLTSFQIGDLQSYLSDLTLYLAPDSKTFYVLVDNRPWLEDLPSRPAHLWQLMVTKSRMSPFANTRGRKGKNEPREFVDKKDSSKGLSKSQNLKKWFSVVDAATLSKKRALLPVKKLRTSLLANSKLHRTLFGFIVFQVAWKDVRGMNYLNELQTDTSLAIEAKYMKRWEFDSIAQAAKCITTWFPGTSRERCLLEEHLDSMLGDVFHDAPKEFPDHQNTNHDENTSITSVQKENESPCTPRCNHGDILETLVDQTNCKTNTVHTPPPAGPYKRRKLTSPTALDIKPNFYAEVAHGGAFCTPTASSYASECDETAEATEYRDVLLIFRFNDHDLPFELQKIIVSDLRLLTLLEAGLPSWVIFCQSYPVFCHIYRPWMALLARVLYVIISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFFSIITQPLAGPFVEFLEVLFPVWNLIVETGQYLCSFVWILMETSWDVAENLFEVVLLPVWFLLSFIWMIVKSVMYPIIWCLWGILYAPISLILGLSSFVGFVYNEIYDLARDIWLFMSGIFKLASSAEATVHTYEVSVWRSLWNDLFSQVFRAVRSILHGFVAFVAACNRHRLSIYNHLQELIRTVNQPSQRSQSLNPSHESQPSKSSHGSQRSGSQIPEEVGEQKLRSRRSLKM* 706
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12093 705 MobiDBLite consensus disorder prediction 72 97 - -
Artr3g12093 705 MobiDBLite consensus disorder prediction 658 705 - -
Artr3g12093 705 MobiDBLite consensus disorder prediction 658 689 - -
Artr3g12093 705 MobiDBLite consensus disorder prediction 78 97 - -
Artr3g12093 705 PANTHER OS05G0597400 PROTEIN 4 693 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12093 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
21929 Artr1g02167 Artr3g12093
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:414839429 Artr5g01936 Artr-Chr5:61949702 dispersed
Artr Artr-Chr3:123802558 Artr3g12093 Artr-Chr3:414839429 transposed
Artr Artr-Chr7:213249887 Artr3g12093 Artr-Chr3:414839429 transposed
Artr Artr-Chr1:62611167 Artr3g12093 Artr-Chr3:414839429 wgd