AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12191 ATGACGGGAAAGAAACGATTTGCTTCAAAATCAGTGATATTTTTATTGGTGTTAATATGTATCGTTGTATTAGTGGGGTTATTATCTCAATTTAAGCTTCAATCATCTACTGAATTCAGTTACAATCATGACTTAATCGAGTATCCGATAATAAAGAATAAGAAGATTGCTTTTTTATTTCTTGTTAGAGATAACCTTCCTCTTGATTTCCTTTGGCATAATTTCTTTAAGAATGCAGATCCTGAGAATTTCACAATCTACATACATTCCAAGCCTGGTATTCTGTTCGATAAGTCAGTTACCAAATCAGCTTTCTTCTACAATCGGCAGTTGAGGAACAGTGTTGAGGTCGGTTGGGGTACACCAACTATGATTGAAGCAGAGAAGCTGTTATTCAAGGCGGCCCTTGATGATCCACAAAATCAGATATTCATTCTCCTCTCTGACAGCTGTGTCCCACTGTATAATTTCAGTTATATATACAAATATCTCATGTCATCTCCAAGAAGTTTTGTGGACAGATACCACAGATGA 534 35.96 MTGKKRFASKSVIFLLVLICIVVLVGLLSQFKLQSSTEFSYNHDLIEYPIIKNKKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYIHSKPGILFDKSVTKSAFFYNRQLRNSVEVGWGTPTMIEAEKLLFKAALDDPQNQIFILLSDSCVPLYNFSYIYKYLMSSPRSFVDRYHR* 178
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12191 177 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 15 176 IPR044174 GO:0016757(InterPro)
Artr3g12191 177 Pfam Core-2-I-Branching enzyme 56 175 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12191 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:419239098 Artr9g04451 Artr-Chr9:178482367 dispersed