Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g12193 | ATGGGTGAAACCCTAACTCCTAACCGTACACCAGGCCACAAACAAAGACCACAAATCCTATCACCCGACCGACCGCTTTTCCTCGGTTCTAATGACGACAAGCTCGAACGCGCTCAAGCACGCGCCGCACGCGCTGCCGCTATCCGTCGAAAACCGGTCGCTGCTCGTCAAGCGACCGACTCCACGGATCCGCCGTGTCTTGGTCAGGAGCAGATTATGGAGTTGTTTCAGAACTGCATCAAATTAGCTAGTGAAAATAAAATAAATCAGAAGAATACGTGGGAGTTGAATTTGATTGATCATTTGTGCGATATTATTAAAGTCGAAGAGGAGAATGACGTCGAAACCAATTTTCAGAAGGCAAGTTGCACTCTTGAAGCTGGAGTTCGAATATACTCAATGAGGGTGGATTCAGTCCATTCTGAAGCATATAAGGTTCTCGGAGGGATTAGTCGAGTTACACTGGACTCCGAACAAGATATTGTAGATGATGGCAACACAGACAACATGCCAGGAGAACGCACCACAAAGAAGGAGAAGGAGCACAAGTTATCTCCTTTAACGACATTGGAATCATCCTTTGAGGCTCTTAATGTAAAAAAGTTTGATGTTGCATTTGCTGTGGACCCTCTGTATCATCAAACAACTGCCCAGTTTGATGAAGGCGGATCAAAAGGTCTTTTACTGAATAACCTTGGAGTCTATGGTGGCTGCCGAATGGTTTTTGATTCACTTGAAGTACCCGGGAAGTGCATGTCATGCTCAAATGGCCACGATAAAGTAGATACTATTGATATTTCTTATGCCAAAGATGCTATGGAACAAATGGTATCAAACTTCTCAAAGAAACTTGAAATATCACCAACTCTAAGGGCTATAGTCAATATGTTTGATGAAGATAATAGAAGACCAGCAGATACCTTTTCGTCTTCCCAAAACTCTGTAGAACCCGATTATGAAGCTTATGATGATAATGCATATAATGAAGGTGGACATGATGAACCTTCAACCTGGGACTACATTAATGATAATCAGGCAAGCGTGCATGATGAGGGCGCATATGAAGGAGATGAAGAACTCTTTGCACCGGTTCATCATGAGGAGAACGAGCCGTATGCTTCTCAAAATGGTGAAGTAGATGACAAATTTGCTACAGTTGACAGCTTTCTGTTTCTAAGTCTTGGCTTAAATGGAAAACAAAATGCATGGGCAGGTCCCGAGCATTGGAAATATCGGAAGATTAAAGGTGTAGAAGACCCTGTCAAGGAAAATGGATCGTCACCAGTAATGGCGAAAAAACCAAGGAATAAGAAACAAGCCGAACCTGAAGTAGAATTTATGAAAGCATTGGATTTGGAAAGTGACATGGATAATATCTTTGCTCCTCCTAAAAATCCAAGAACACTGTTGTTGCCTGCAAATAGGGAACCCGGTAACACCACACTTCCAGAGGATTGCCATTATCAACCAGAAGACCTTGTGAAGCTATTTTTTCTTCCAAATGTTATGTGCCTTGGAAAGAGAGGAAGAAGGCATTCAGATGAAGCTGGTCAACAAGGAGAAGGGAATAACGAAACATTTGCGTCTTGGGATGATGAATGTGGGCAATTTGAAGATGGAAATGCTTTTGACGATGGAAATGCTTACGGTGATGTTGAGGACTCTACCACACTTGTCTCTCAGCCTCGTCAGGTAAATAAGATTGAAGTCGAGTATGACAAAACATCTAAGCAAGTTGATGTTCAGGCACTCAAAGAGACTCTTTGGTCATCTATGCAAGAAACACCTGAAACAAAGACATTGTCTTTTAAGCACTTATTGACATCTTTTCCAGCGGATAAGAAGCCGGCTGCTGCATCCATTGATGTCATCTCCCCACATCTTTGTTTCATTTGCGTGTTACATTTGGCTAACGAGCATGGATTGAGCATCCATGGATGTGCTAACTTGGATGACCTCACAATACACCTTCCCTTAGAAGTGGTCTAA | 1989 | 42.63 | MGETLTPNRTPGHKQRPQILSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVAARQATDSTDPPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVTLDSEQDIVDDGNTDNMPGERTTKKEKEHKLSPLTTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMVFDSLEVPGKCMSCSNGHDKVDTIDISYAKDAMEQMVSNFSKKLEISPTLRAIVNMFDEDNRRPADTFSSSQNSVEPDYEAYDDNAYNEGGHDEPSTWDYINDNQASVHDEGAYEGDEELFAPVHHEENEPYASQNGEVDDKFATVDSFLFLSLGLNGKQNAWAGPEHWKYRKIKGVEDPVKENGSSPVMAKKPRNKKQAEPEVEFMKALDLESDMDNIFAPPKNPRTLLLPANREPGNTTLPEDCHYQPEDLVKLFFLPNVMCLGKRGRRHSDEAGQQGEGNNETFASWDDECGQFEDGNAFDDGNAYGDVEDSTTLVSQPRQVNKIEVEYDKTSKQVDVQALKETLWSSMQETPETKTLSFKHLLTSFPADKKPAAASIDVISPHLCFICVLHLANEHGLSIHGCANLDDLTIHLPLEVV* | 663 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g12193 | 662 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Artr3g12193 | 662 | Pfam | Condensin complex subunit 2 | 551 | 655 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Artr3g12193 | 662 | Pfam | Condensin complex subunit 2 | 24 | 537 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Artr3g12193 | 662 | PIRSF | Condensin-H | 3 | 555 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Artr3g12193 | 662 | PIRSF | Condensin-H | 539 | 659 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Artr3g12193 | 662 | PANTHER | CONDENSIN COMPLEX SUBUNIT 2 | 16 | 657 | IPR022816 | GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(InterPro)|GO:0007076(PANTHER) | |
| Artr3g12193 | 662 | MobiDBLite | consensus disorder prediction | 420 | 442 | - | - | |
| Artr3g12193 | 662 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g12193 | K06676 | condensin complex subunit 2 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 21936 | Artr1g02238 | Artr3g12193 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr1:65139011 | Artr3g12193 | Artr-Chr3:419380384 | wgd |