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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12239 ATGATTTACCTATTTTACAGCGTATTAGTACTCGAAATGTCGACAATCTTACTGCTTTTATTCAAAACACCACTCCGTAAGCTATTAATAATCGGTTTAGATCGAGCCAAGAGAGGACGTGCACCGTTGGTTGTTAAATCCGTTGGTGCAACTGTTTTTGTTATTATGATGTACAACGTTTATAGTGTTACTGAGATACAAAGCAGGGCTGAGGAGGCTGTTGTTAATCCTACTGATCAGATTCTTTTGGCTTATAATCTACTTGAAGCTTCACTTATGGGATTCTCGCTTTTCCTGGCACTGATGATAGATAGGCTACATCATTACATCAGAGAACTTCGCATAATTAGAAAGACCATGGAAGCTGCAAAGAAACAAAACCGGACAGCTGAAGAAACCAAGAACAAAGGTGCAGATGAGGTTAAAATCTTGAACGAAGAAATGTCTAAATTGAAAACACAAATCCAAAATCTGGAATCTGAACATGCAACAAAGGAGAAAGAGATTAAATCTGCAGAAGCCAATTCAATTGCACTCAAGAACCAATCAGAAGGCTTCCTTCTTGAATACGACCGCTTGCTAGCAGAAAACCAACAGCTTAGAGATCAACTACGTTCCATCGATGAAAATATGTCTCATTCCAATGGAAAGAAGAATATGTGA 663 38.31 MIYLFYSVLVLEMSTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRAEEAVVNPTDQILLAYNLLEASLMGFSLFLALMIDRLHHYIRELRIIRKTMEAAKKQNRTAEETKNKGADEVKILNEEMSKLKTQIQNLESEHATKEKEIKSAEANSIALKNQSEGFLLEYDRLLAENQQLRDQLRSIDENMSHSNGKKNM* 221
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12239 220 Coils Coil 113 182 - -
Artr3g12239 220 PANTHER BCR-ASSOCIATED PROTEIN, BAP 2 201 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Artr3g12239 220 FunFam B-cell receptor-associated protein 29 137 200 - -
Artr3g12239 220 Coils Coil 190 210 - -
Artr3g12239 220 Gene3D - 137 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12239 K14009 B-cell receptor-associated protein 31
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:8384169 Artr3g12239 Artr-Chr3:420953997 dispersed
Artr Artr-Chr3:134999801 Artr3g12239 Artr-Chr3:420953997 dispersed
Artr Artr-Chr3:420953997 Artr4g03285 Artr-Chr4:102464161 dispersed
Artr Artr-Chr3:420738576 Artr3g12239 Artr-Chr3:420953997 proximal