Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g12247 | ATGAAGCAATGGAGCATGAAGACTACATTGTTAATGTTACTAGCAATGTTGTATACTATAAATGGTGAAGACCCTTATAGGTTTTTTGATTGGAATGTTACTTATGGTGATATTTACCCTCTTGGAGTCAAGCAACAGGGGATATTGATTAATGGGCAGTTTCCTGGGCCACAAATCGACTCTGTTACTAATGATAATGTGATTGTTAGTATTTACAACAACTTGGATGAACCATTCCTTATTACATGGAATGGGATACAACAAAGGAGAAATTCATGGCAAGATGGAGTTTACGGCACGAATTGCCCAATCCCACCTGGCCAAAACTTTACATACATTCTTCAAGTCAAGGATCAAATTGGTAGTTTCTTCTACTTTCCGTCGCTTGGGATGCACCGGGCTGCTGGAGGGTATGGTGGCATTACAATCTCCAGTCGCCCGAGGATCCCTGTCCCATTCCCTCCACCCGCAGGAGATTTCACTATTCTGGCGGGTGATTGGTTTAAGCAAAACCACACCGATTTGAAAGCAACATTAGACGGAGGGCATGATCTTCCATTCCCTGATGGTCTCCTTATTAATGGTCGTGGATCTAACGGATTTACATTCAACGTTGATCAAGGGAAAACTTATAGGCTGAGGATATCAAACGTGGGACTTACTACATCAATCAACTTCAGGATCCAAGGCCATAAGATGTTGCTAGTAGAGACCGAAGGAACTCATACTCTTCAAAACACATACTCTTCTCTCGATATTCATTTGGGCCAATCATACTCGGTTTTGATCACTGCTGATCAACCACCGGCAAATTACTATATGGTTGTCTCAACTAGATTCACCTCTCAAGTCCTTAGTGCTACCTCCATTCTTCGTTACAGCAATTCCGGGGGATCTTTCCCAGCTCCTCCACCTGGTGGTCCCACCATCCAAATCGACTGGTCTTTGAATCAAGCCCGGTCTATTAGACAAAACTTGACAGCAAGTGGACCAAGGCCTAATCCCCAAGGGTCATACCATTATGGTATGGTTAACTTCACTAGAACCATAAGGCTCGCGAACTCTGCTCCTATTATAAATGGCAAACAGAGATACGCTGTCAACAGTGTGTCGTTTATACCAGCAGACACACCTCTAAAGATTGCCGATTATTTTAAGATCTCGGGTGTGTTTTCCATTGGAACCATTTCCGACAGCCCCAATGGTGGTGGTGGTTACCTTCAAACTTCCGTCATGGCTGCTGATTTCCGAGCATTTGCTGAAATTGTTTTTGAGAATTCAGAAGATACCGTGCAATCTTGGCACATTGATGGACACTTTTTCTTTGTCGTTGGGATGGATGGAGGGCCATGGTCAGCAGCTAGCAGAACGAGCTACAATTTAAGAGACGGGATATCTCGCTCTACAGTTCAAGTATACCCAAGATCATGGACAGCATTGTATGTACCACTAGACAATGTTGGTATGTGGAACATAAGATCTCAGAATTGGGCTAGACAATACTTAGGTCAACAATTTTACCTTCGAGTTTATTCACCGGTAAATTCATGGAGAGACGAGTACCCGATCCCAAAGAATGCCATTACTTGCGGCCGAGCAAGTGGTCGCAAGACACGTCCTTTGTAA | 1626 | 43.67 | MKQWSMKTTLLMLLAMLYTINGEDPYRFFDWNVTYGDIYPLGVKQQGILINGQFPGPQIDSVTNDNVIVSIYNNLDEPFLITWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQVKDQIGSFFYFPSLGMHRAAGGYGGITISSRPRIPVPFPPPAGDFTILAGDWFKQNHTDLKATLDGGHDLPFPDGLLINGRGSNGFTFNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVETEGTHTLQNTYSSLDIHLGQSYSVLITADQPPANYYMVVSTRFTSQVLSATSILRYSNSGGSFPAPPPGGPTIQIDWSLNQARSIRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPIINGKQRYAVNSVSFIPADTPLKIADYFKISGVFSIGTISDSPNGGGGYLQTSVMAADFRAFAEIVFENSEDTVQSWHIDGHFFFVVGMDGGPWSAASRTSYNLRDGISRSTVQVYPRSWTALYVPLDNVGMWNIRSQNWARQYLGQQFYLRVYSPVNSWRDEYPIPKNAITCGRASGRKTRPL* | 542 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g12247 | 541 | Pfam | Multicopper oxidase | 32 | 146 | IPR011707 | GO:0005507(InterPro) | |
| Artr3g12247 | 541 | Gene3D | - | 342 | 538 | IPR008972 | - | |
| Artr3g12247 | 541 | FunFam | Monocopper oxidase-like protein | 343 | 540 | - | - | |
| Artr3g12247 | 541 | CDD | CuRO-1-AAO-like-1 | 28 | 143 | IPR034273 | GO:0005507(InterPro) | |
| Artr3g12247 | 541 | Gene3D | - | 157 | 332 | IPR008972 | - | |
| Artr3g12247 | 541 | SUPERFAMILY | Cupredoxins | 153 | 333 | IPR008972 | - | |
| Artr3g12247 | 541 | Pfam | Multicopper oxidase | 159 | 296 | IPR001117 | - | |
| Artr3g12247 | 541 | Gene3D | - | 26 | 147 | IPR008972 | - | |
| Artr3g12247 | 541 | SUPERFAMILY | Cupredoxins | 343 | 532 | IPR008972 | - | |
| Artr3g12247 | 541 | FunFam | Monocopper oxidase-like protein | 157 | 331 | - | - | |
| Artr3g12247 | 541 | PANTHER | MULTI-COPPER OXIDASE | 27 | 507 | IPR045087 | GO:0016491(PANTHER) | |
| Artr3g12247 | 541 | SUPERFAMILY | Cupredoxins | 19 | 173 | IPR008972 | - | |
| Artr3g12247 | 541 | Pfam | Multicopper oxidase | 376 | 513 | IPR011706 | GO:0005507(InterPro)|GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g12247 | K19791 | iron transport multicopper oxidase |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 21941 | Artr1g02258 | Artr3g12247 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr1:287247743 | Artr3g12247 | Artr-Chr3:421329637 | dispersed | |
| Artr | Artr-Chr3:421329637 | Artr6g11604 | Artr-Chr6:409613898 | dispersed | |
| Artr | Artr-Chr1:153868064 | Artr3g12247 | Artr-Chr3:421329637 | transposed | |
| Artr | Artr-Chr3:9698027 | Artr3g12247 | Artr-Chr3:421329637 | transposed | |
| Artr | Artr-Chr5:427518439 | Artr3g12247 | Artr-Chr3:421329637 | transposed | |
| Artr | Artr-Chr7:44564944 | Artr3g12247 | Artr-Chr3:421329637 | transposed | |
| Artr | Artr-Chr1:65559357 | Artr3g12247 | Artr-Chr3:421329637 | wgd |