Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Artr3g12279	ATGGAGTTGAAAGATAAGATTAAGATAGTAGTTACAGTGTCCTGTGTTACTGTACTTGCAACAGTTATTAAAGTGTTATTAGATAAAAGAGATCGAAGGCTAAAAGAGTCGTGTTATTTGAAAACAGAGGCCAAATGTCAGCATAACTTTAAGCGTGTTTTGGCTAATAATTCTTACGCGCCTTTTAAGCATTTCAAGATTCATGACAATTCTACGGATTTGCATCCTTATGAATCGGAGATCAAGGCTCTGTTGGAGAAACCACAGCTAGATATTGAATTTTCTAATGGTAAGATGGGTGACATGAAGGATGCATATGTTTGGGTTGACAATGAAGTAAAGTTGAAACAGCTTGTTGAAATATTGAGTAAAGAAAGAGTGTTTGCTGTGGATACTGAACAACATAGTTTACGTTCGTTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACAAGAGATGAAGATTATTTGGTGGACACCATCGCTCTTCATGATGTTATGGGAATCCTCGGCCCTGTATTTGCCAATCCCAATATATGCAAGGTTTTTCATGGCGCTGATAACGATGTTGTATGGCTACAAAGGGATTTTCATATCTATGTTGTAAACTTATTTGACACTGCCAAGGCATGTGACGTGTTATCAAAACCACAGCGATCATTAGCATACTTACTTGAAACATATTGTGGTGTTATCACTAACAAGTTTTACCAGCGTGAAGATTGGAGACTACGTCCACTGCCAGAAGATATGCTTGAATATGCTCGGATGGATGCACACTATTTGTTGTATATTGCAGATTGTCTTGTTGCTGAGCTCAAACTCCAGAAAAATGCCAGTCTCGATGACAACAAATTCGATTTTGTTTACGAGGCCAGCCGGCGTTCCAATGCTGTGTGTCTGCAACTATTCACTAAAGAACTAGAAGCTTCCCCGGGGCAGTCTGCTGCTGCTTCAATTATTTCCAGGCACTTGAATGATCCTGGAAGCTCTACAAACAACAGTCAGTTTCAGGGTATTGTCAGACGCCTATGCTGTTGGAGGGATTTCATGGCCCGCATGCATGATGAGAGCCTTAAATACGTACTATCCGATAATGCTATTGTCGCGCTTGCCGAAAAAGTACCAGTAACCGAAACAGATATTTCCACTACAATATCACAAGCTGATACACATCTTGACTTTCTCAATTCAAATTCTACCACTCGTTCTCCATCGTCCGTAGTTTTAAGTCATTTGGTTGATTTCCGTTTTCTTCTTCAAGGTGAATTACAGAATCCTGATGAAATACTACAAATCTATATCAAGAAGCATCTTGGGCCAAATGGTTCTTGCCCTTTATCTCTTTACAACTACGGCCTACTGTCTAACAACAATATTAAAGTGCCAAAGAGATTAGTTTCAAAAGAAAATGGATATAAATTTTCAAAACAGGTTGCTAGGAAGGCTTCTCGACAGCTTTTTGTTCAGAAGTTTTCCTGTAAATCGCCAGTTTATCACAATTGCAGGATATATGCTAATGATGGACGATTGTTATGTTACTGTGATCGAAGGAAGCTAGAATGGTATTTGAAGAGAGATCTGGCAAAACTTGTTGATGAAGATCCACCAGCCATAATGCTTCTCTTTGAACCTAAAGGCCGGCCAGAAGATGAAGGAAATGATTTCTATATACAGAGCAAGAAAAATATATGTGTAGGCTGTGGTGAAGGAAACCACTACTTACGCTACCGTATCATCCCATCATGTTATAGAATACACTTCCCTGAACATCTAAAAAGCCACCGCTCTCACGATATTGTTCTAGTTTGTGTCGATTGTCATGAAAAAGCACACTCTTTTGCTGAAAAGTATAAGAAGAAAGTCGCTTCGGACTATGGGATACCGTTATTTGTACACAAAGTGGTTAATTCTAGTGAGGGAGATGGTGTTTCTGGAGGTTCTACGTCTGTCATGAAACTTGGTGATGGGGGTGTGTCTCCTTTAGAGTTGCGTACGGCTGCAATGGCTCTATTGAGGCATGGTCCTAGGATGCCGCCTCAACGCCGTGAGGAATTGACACAGATTGTCAGGAAGTATTATGGAGGACGAGAGATATCGGATGAAGACTTGGAAAATGCTTTCTATGTTGGAATGAGTCCTCACGAGAAACGACGAATGCAGAAAAAGAGAGGCTCGTTTCTTAATAGTTCCTCAAAAAACATCGTCTCAGATACAGCACTAAATAGTGATATAGAAGATGGTGCAGACACGTCTAAAAATGAAATTAATGAGCCTGGAAATGGTTCTATGTTGGATTCAGATATCAATTCTGAACCTACGGATGCATCTGCTAAACAAAATGGATCTGTAAACTTAAGTTCTGATGGTGGAATTGCTACATGCGGTTCAAAATTATCGTTATTAGGGCATGGACCACATGGGAAGCAAGTTGTTGATTATCTGCTGAAGGAACATGGGGAAGATGGGATTCGTGAATTTTGTCAAAGATGGAGACAAGTGTTTGTTGAAGCAATCAATCCTCGGTTTTTACCAGCTGGTTGGGATGTGACACATAGTGGTAGAAGGGAGTTCGGGGACTTCAGCGTATACAATCCTGCCAAGAAGGGACCTTCTTCTGCTGCTAAGGATCTGACCATGTAG	2643	40.3	MELKDKIKIVVTVSCVTVLATVIKVLLDKRDRRLKESCYLKTEAKCQHNFKRVLANNSYAPFKHFKIHDNSTDLHPYESEIKALLEKPQLDIEFSNGKMGDMKDAYVWVDNEVKLKQLVEILSKERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIALHDVMGILGPVFANPNICKVFHGADNDVVWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETYCGVITNKFYQREDWRLRPLPEDMLEYARMDAHYLLYIADCLVAELKLQKNASLDDNKFDFVYEASRRSNAVCLQLFTKELEASPGQSAAASIISRHLNDPGSSTNNSQFQGIVRRLCCWRDFMARMHDESLKYVLSDNAIVALAEKVPVTETDISTTISQADTHLDFLNSNSTTRSPSSVVLSHLVDFRFLLQGELQNPDEILQIYIKKHLGPNGSCPLSLYNYGLLSNNNIKVPKRLVSKENGYKFSKQVARKASRQLFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLKRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSFAEKYKKKVASDYGIPLFVHKVVNSSEGDGVSGGSTSVMKLGDGGVSPLELRTAAMALLRHGPRMPPQRREELTQIVRKYYGGREISDEDLENAFYVGMSPHEKRRMQKKRGSFLNSSSKNIVSDTALNSDIEDGADTSKNEINEPGNGSMLDSDINSEPTDASAKQNGSVNLSSDGGIATCGSKLSLLGHGPHGKQVVDYLLKEHGEDGIREFCQRWRQVFVEAINPRFLPAGWDVTHSGRREFGDFSVYNPAKKGPSSAAKDLTM*	881

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Artr3g12279	880	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	35	869	IPR045092	GO:0000175(PANTHER)\|GO:0000175(InterPro)\|GO:0000176(PANTHER)\|GO:0000467(PANTHER)\|GO:0000467(InterPro)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Artr3g12279	880	MobiDBLite	consensus disorder prediction	738	783	-	-
	Artr3g12279	880	Gene3D	-	27	310	IPR036397	GO:0003676(InterPro)
	Artr3g12279	880	Pfam	3'-5' exonuclease	106	273	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Artr3g12279	880	SUPERFAMILY	HRDC-like	332	387	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Artr3g12279	880	CDD	Rrp6p-like-exo	102	294	IPR049559	-
	Artr3g12279	880	Gene3D	HRDC domain	328	429	IPR044876	-
	Artr3g12279	880	MobiDBLite	consensus disorder prediction	754	783	-	-
	Artr3g12279	880	SMART	35exoneu6	106	274	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Artr3g12279	880	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	44	310	-	-
	Artr3g12279	880	Pfam	HRDC domain	339	383	IPR002121	GO:0003676(InterPro)
	Artr3g12279	880	SUPERFAMILY	Ribonuclease H-like	46	289	IPR012337	-
	Artr3g12279	880	ProSiteProfiles	HRDC domain profile.	334	423	IPR002121	GO:0003676(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Artr3g12279	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Artr	Artr-Chr3:422145405	Artr4g10009	Artr-Chr4:351741984	dispersed
	Artr	Artr-Chr3:422145405	Artr7g06824	Artr-Chr7:250119064	transposed