AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12477 ATGGAAGAAAAACTAATACAAAGGCTAGAATCCGCAGTATCACGCTTAGAGTCACTCGCGTCGGGTTCTCGTTCTCAGCCGCAAAGTGTCCCATATGACGCTGCATCAGCCTCGTCTGACCCGTCTATCGTGGCATTTGATGATCTGGTAAATGAATACGTTGCTAAGGTAACCGGCGCGGCTGAGAAGATTGGGGGACAAGTTGTTGAGATTACGAATGTTTTAGGACAAGCTTTTAATGCTCAGAAGGAGCTGCTTGTTAAGATCAAACAAACTCAGAAACCTGATGCTGGAGGGATGGCGGAATTTCTCAAGCCATTAAATGAAAAGTTAATGAAAGCAAATAGCATGACAGAAGGACCGCGTTCTGATTCTTTTAACCACTTAAGATCAGTTGCTGAGAGTCTAACAGCTTTAGCATGGATTGCTTATACAGGGAAAAATTGTGGAATGAACATGCCTATTTCACATGTGGAAGAATGTTGGCAGTCAGCTGAGTTTTACAGCAACAAGGTTCTAGTAGAGTACAGAAGTAAAGATCCAAATCACGCCGAATGGGCAAAAGCACTGAAGGAACTTTATGTACCAGGGTTGAGGGATTATGTGAAGAGTTACTATGCGTTGGGACCTGTATGGAGTGCAACTGGGGCTACCGTATCTGCTCCAGCCAAATCTTCTAAACCCGGTGCTCCTTCTGCTCCAAATCCTCCACCAGCGTCGCTTTCGAGCTCAGGAGCTTCTTCTTCTTCTTCATCATCTTCTTCCCGACCAAAACAAGGAATGGCCGCTGTTTTTCAGGAAATTAGTTCAAAGCCCGTTACTGCTGGCTTAAGAAAAGTTACGGATGACATGAAGGCCAAGAATCGCAAAGATAGAGCGGGTATTGTCAGTTCAGGTGAAAAAGAAGCCAGAAAGAGTGCAGCATCTGCTGCTAAAGCTGGGCCGCCAAAGCTTGAGCTTGTAATGGGCCGCAAATGGGTTGTGGAGAATCAAATTGGCGCGAAGGATCTGTGCATTGATGAGTGTGATGCAAGGCAGACAGTTTATATTTTTGGATGCAAAGATTCGGTTCTACAGATCAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCGCGAAAATGGGTGTTGTATTCACGGATGTTGTTGCTGCTTTTGAGATTGTTAATTGCAACGGTGTTGAGGTGCAATGTCAGGGTGCGGCTCCTACCATTTCCATAGACAACACATCAGGTTGCCAGTTATATTTGAGCAAAGATTCTCTTGAATCTTCTATAACAACTGCAAAGGCGAGTGAAGTTAATGTCATGGTACCTGCTGAAGATCCTGATGCTGATATGGCGGAACATGCTATGCCACAACAGTATATTCACACTTATAAGGATGGCAACTTCATTACGACCCCTGTCTCCCACTCTGGAGGGCGTTCTGAACTCGAAATTAATGAGGTTCCGGAGAGTAAAGCCAACTACGTTAACCGCAATTCTGTTAACACTAACCCCAATTCCATTAATGTTAATCCCAACTTTGTTAACGTTAATCGCAACAATATTAACGTTAACGATCAACCGTGGATATACTATATGCTTGCAGCAGTAGGCGTACTCTTTGCTTTGATAGTGGCAATCACAATGAAATATTAA 1644 43.73 MEEKLIQRLESAVSRLESLASGSRSQPQSVPYDAASASSDPSIVAFDDLVNEYVAKVTGAAEKIGGQVVEITNVLGQAFNAQKELLVKIKQTQKPDAGGMAEFLKPLNEKLMKANSMTEGPRSDSFNHLRSVAESLTALAWIAYTGKNCGMNMPISHVEECWQSAEFYSNKVLVEYRSKDPNHAEWAKALKELYVPGLRDYVKSYYALGPVWSATGATVSAPAKSSKPGAPSAPNPPPASLSSSGASSSSSSSSSRPKQGMAAVFQEISSKPVTAGLRKVTDDMKAKNRKDRAGIVSSGEKEARKSAASAAKAGPPKLELVMGRKWVVENQIGAKDLCIDECDARQTVYIFGCKDSVLQIKGKVNNITVDKCAKMGVVFTDVVAAFEIVNCNGVEVQCQGAAPTISIDNTSGCQLYLSKDSLESSITTAKASEVNVMVPAEDPDADMAEHAMPQQYIHTYKDGNFITTPVSHSGGRSELEINEVPESKANYVNRNSVNTNPNSINVNPNFVNVNRNNINVNDQPWIYYMLAAVGVLFALIVAITMKY* 548
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12477 547 MobiDBLite consensus disorder prediction 279 311 - -
Artr3g12477 547 MobiDBLite consensus disorder prediction 219 261 - -
Artr3g12477 547 Pfam Adenylate cyclase associated (CAP) C terminal 315 472 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Artr3g12477 547 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Artr3g12477 547 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 473 IPR001837 GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Artr3g12477 547 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 315 474 IPR036223 -
Artr3g12477 547 MobiDBLite consensus disorder prediction 279 299 - -
Artr3g12477 547 Gene3D - 42 217 IPR036222 -
Artr3g12477 547 Pfam CAP N-terminal conserved motif 3 38 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Artr3g12477 547 FunFam Adenylyl cyclase-associated protein 42 217 - -
Artr3g12477 547 ProSiteProfiles C-CAP-cofactor C-like domain profile. 315 452 IPR017901 -
Artr3g12477 547 Gene3D - 314 474 IPR016098 -
Artr3g12477 547 MobiDBLite consensus disorder prediction 239 260 - -
Artr3g12477 547 SMART carp 353 390 IPR006599 -
Artr3g12477 547 SMART carp 391 428 IPR006599 -
Artr3g12477 547 FunFam Adenylyl cyclase-associated protein 314 474 - -
Artr3g12477 547 Pfam CAP, N-terminal domain 46 209 IPR053950 -
Artr3g12477 547 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 42 238 IPR036222 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12477 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
22434 Artr2g05104 Artr3g12477
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr2:164808359 Artr3g12477 Artr-Chr3:428353313 wgd