Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g12477 | ATGGAAGAAAAACTAATACAAAGGCTAGAATCCGCAGTATCACGCTTAGAGTCACTCGCGTCGGGTTCTCGTTCTCAGCCGCAAAGTGTCCCATATGACGCTGCATCAGCCTCGTCTGACCCGTCTATCGTGGCATTTGATGATCTGGTAAATGAATACGTTGCTAAGGTAACCGGCGCGGCTGAGAAGATTGGGGGACAAGTTGTTGAGATTACGAATGTTTTAGGACAAGCTTTTAATGCTCAGAAGGAGCTGCTTGTTAAGATCAAACAAACTCAGAAACCTGATGCTGGAGGGATGGCGGAATTTCTCAAGCCATTAAATGAAAAGTTAATGAAAGCAAATAGCATGACAGAAGGACCGCGTTCTGATTCTTTTAACCACTTAAGATCAGTTGCTGAGAGTCTAACAGCTTTAGCATGGATTGCTTATACAGGGAAAAATTGTGGAATGAACATGCCTATTTCACATGTGGAAGAATGTTGGCAGTCAGCTGAGTTTTACAGCAACAAGGTTCTAGTAGAGTACAGAAGTAAAGATCCAAATCACGCCGAATGGGCAAAAGCACTGAAGGAACTTTATGTACCAGGGTTGAGGGATTATGTGAAGAGTTACTATGCGTTGGGACCTGTATGGAGTGCAACTGGGGCTACCGTATCTGCTCCAGCCAAATCTTCTAAACCCGGTGCTCCTTCTGCTCCAAATCCTCCACCAGCGTCGCTTTCGAGCTCAGGAGCTTCTTCTTCTTCTTCATCATCTTCTTCCCGACCAAAACAAGGAATGGCCGCTGTTTTTCAGGAAATTAGTTCAAAGCCCGTTACTGCTGGCTTAAGAAAAGTTACGGATGACATGAAGGCCAAGAATCGCAAAGATAGAGCGGGTATTGTCAGTTCAGGTGAAAAAGAAGCCAGAAAGAGTGCAGCATCTGCTGCTAAAGCTGGGCCGCCAAAGCTTGAGCTTGTAATGGGCCGCAAATGGGTTGTGGAGAATCAAATTGGCGCGAAGGATCTGTGCATTGATGAGTGTGATGCAAGGCAGACAGTTTATATTTTTGGATGCAAAGATTCGGTTCTACAGATCAAAGGGAAAGTTAACAACATAACTGTTGACAAATGCGCGAAAATGGGTGTTGTATTCACGGATGTTGTTGCTGCTTTTGAGATTGTTAATTGCAACGGTGTTGAGGTGCAATGTCAGGGTGCGGCTCCTACCATTTCCATAGACAACACATCAGGTTGCCAGTTATATTTGAGCAAAGATTCTCTTGAATCTTCTATAACAACTGCAAAGGCGAGTGAAGTTAATGTCATGGTACCTGCTGAAGATCCTGATGCTGATATGGCGGAACATGCTATGCCACAACAGTATATTCACACTTATAAGGATGGCAACTTCATTACGACCCCTGTCTCCCACTCTGGAGGGCGTTCTGAACTCGAAATTAATGAGGTTCCGGAGAGTAAAGCCAACTACGTTAACCGCAATTCTGTTAACACTAACCCCAATTCCATTAATGTTAATCCCAACTTTGTTAACGTTAATCGCAACAATATTAACGTTAACGATCAACCGTGGATATACTATATGCTTGCAGCAGTAGGCGTACTCTTTGCTTTGATAGTGGCAATCACAATGAAATATTAA | 1644 | 43.73 | MEEKLIQRLESAVSRLESLASGSRSQPQSVPYDAASASSDPSIVAFDDLVNEYVAKVTGAAEKIGGQVVEITNVLGQAFNAQKELLVKIKQTQKPDAGGMAEFLKPLNEKLMKANSMTEGPRSDSFNHLRSVAESLTALAWIAYTGKNCGMNMPISHVEECWQSAEFYSNKVLVEYRSKDPNHAEWAKALKELYVPGLRDYVKSYYALGPVWSATGATVSAPAKSSKPGAPSAPNPPPASLSSSGASSSSSSSSSRPKQGMAAVFQEISSKPVTAGLRKVTDDMKAKNRKDRAGIVSSGEKEARKSAASAAKAGPPKLELVMGRKWVVENQIGAKDLCIDECDARQTVYIFGCKDSVLQIKGKVNNITVDKCAKMGVVFTDVVAAFEIVNCNGVEVQCQGAAPTISIDNTSGCQLYLSKDSLESSITTAKASEVNVMVPAEDPDADMAEHAMPQQYIHTYKDGNFITTPVSHSGGRSELEINEVPESKANYVNRNSVNTNPNSINVNPNFVNVNRNNINVNDQPWIYYMLAAVGVLFALIVAITMKY* | 548 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g12477 | 547 | MobiDBLite | consensus disorder prediction | 279 | 311 | - | - | |
| Artr3g12477 | 547 | MobiDBLite | consensus disorder prediction | 219 | 261 | - | - | |
| Artr3g12477 | 547 | Pfam | Adenylate cyclase associated (CAP) C terminal | 315 | 472 | IPR013912 | GO:0003779(InterPro)|GO:0007010(InterPro) | |
| Artr3g12477 | 547 | ProSitePatterns | CAP protein signature 1. | 5 | 17 | IPR018106 | - | |
| Artr3g12477 | 547 | PANTHER | ADENYLYL CYCLASE-ASSOCIATED PROTEIN | 2 | 473 | IPR001837 | GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER) | |
| Artr3g12477 | 547 | SUPERFAMILY | C-terminal domain of adenylylcyclase associated protein | 315 | 474 | IPR036223 | - | |
| Artr3g12477 | 547 | MobiDBLite | consensus disorder prediction | 279 | 299 | - | - | |
| Artr3g12477 | 547 | Gene3D | - | 42 | 217 | IPR036222 | - | |
| Artr3g12477 | 547 | Pfam | CAP N-terminal conserved motif | 3 | 38 | IPR013992 | GO:0003779(InterPro)|GO:0007010(InterPro) | |
| Artr3g12477 | 547 | FunFam | Adenylyl cyclase-associated protein | 42 | 217 | - | - | |
| Artr3g12477 | 547 | ProSiteProfiles | C-CAP-cofactor C-like domain profile. | 315 | 452 | IPR017901 | - | |
| Artr3g12477 | 547 | Gene3D | - | 314 | 474 | IPR016098 | - | |
| Artr3g12477 | 547 | MobiDBLite | consensus disorder prediction | 239 | 260 | - | - | |
| Artr3g12477 | 547 | SMART | carp | 353 | 390 | IPR006599 | - | |
| Artr3g12477 | 547 | SMART | carp | 391 | 428 | IPR006599 | - | |
| Artr3g12477 | 547 | FunFam | Adenylyl cyclase-associated protein | 314 | 474 | - | - | |
| Artr3g12477 | 547 | Pfam | CAP, N-terminal domain | 46 | 209 | IPR053950 | - | |
| Artr3g12477 | 547 | SUPERFAMILY | N-terminal domain of adenylylcyclase associated protein, CAP | 42 | 238 | IPR036222 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g12477 | K17261 | adenylyl cyclase-associated protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 22434 | Artr2g05104 | Artr3g12477 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr2:164808359 | Artr3g12477 | Artr-Chr3:428353313 | wgd |