AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12524 ATGAAAGAGCCTCTTGAATCATTGGTAATAAATAAAAAAGAAAAAGGAAATGAAGAAGCAGTGATAATTGGTGGTATGGTGTTGGATATACATGCTACTCCTTCTATTCATCCTGCCCCTAGAACTACTACTCCTGGCAAGGTGCACTATGCAGCAGGAGGTGTAGCGAGGAACATAGCTGAGTGTGTATCAAAGCTTGGAACAAAGCCTTTCATGATAAGCGCATTAGGATCGGACATGTCAGGGAATATGCTATTGGAGTACTGGAAGTCTGTAGGATTATCAACGCAAGGCATTAGAATGGGCCATGACATAGAGACTCCAGTTGTATGCATTGTTTTTGATACTGAAGGAGAACCAGCTGCTGGTGTTGCAAGCGTTGAATCAGTAGAACGATACCTTACACCACAGTGGATTCAACAATTTAAATCTAATATATCATCTGCTCCTATCGTGATGGTTGATGCAAATTTAAGCCAACCAGCTCTAGAAGCATCTTGTCAATTGGCGGCAGAGGTTGGTACCCCGGTGTGGTTTGAGCCTGTATCAGTAGCAAAGTCGAGAAGAATTGTTTCAGTTGCGAAGTATGTAACCTTTGCTTCGCCTAACGAAGACGAGCTTATTGCAATGGCAAATGCTCTATCTGACAAAGACGTATTTTTTCCAATTCAAAAAGATGGAATCCCAGTAACATCTTTATTTCAACAACTAAAACCCGCAATCTGGGTTTTGCTTGAAAAAGGCATTAGAGTAGTTATTCTAACCCTCGGGTCGAAAGGGGTATTGTTATGTTCCAAGCACCAACTCAGCTTTCAAAATATTGGCCCTAACAGAACAATTAAGTCGCATAATAATGGCCAAAAGTTACACAAAATAATAAATCAAGTCTGCCCATCGGACCAGTTTTTTAGTGGGCTTAAAGAAAGTTCTAGAAGCAGCCCGTTTGTTGTGCATTTTCCAGCTGTATTGTCTTCATCAGTTGTGAGGCTAACAGGAGCGGGTGATTGCTTGGTTGGTGGCTCGATTGCTTCTTTTTGTGTAGGGTTAGATCTAATGCAAAGTATTGCGGTTGGTATAGCAGCTGCTAAGGCTGCTGTTGAGGTTGAGGCAAACGTGCCCACTGAATATAGCTTGGAGCAAATCACGGCCGATGCAAGAACGGTGTACTTGGGTGCCACAGTTGTTTTTAGTCAGTCGATGTTATAA 1206 42.12 MKEPLESLVINKKEKGNEEAVIIGGMVLDIHATPSIHPAPRTTTPGKVHYAAGGVARNIAECVSKLGTKPFMISALGSDMSGNMLLEYWKSVGLSTQGIRMGHDIETPVVCIVFDTEGEPAAGVASVESVERYLTPQWIQQFKSNISSAPIVMVDANLSQPALEASCQLAAEVGTPVWFEPVSVAKSRRIVSVAKYVTFASPNEDELIAMANALSDKDVFFPIQKDGIPVTSLFQQLKPAIWVLLEKGIRVVILTLGSKGVLLCSKHQLSFQNIGPNRTIKSHNNGQKLHKIINQVCPSDQFFSGLKESSRSSPFVVHFPAVLSSSVVRLTGAGDCLVGGSIASFCVGLDLMQSIAVGIAAAKAAVEVEANVPTEYSLEQITADARTVYLGATVVFSQSML* 402
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12524 401 CDD YeiC-kinase-like 21 354 - -
Artr3g12524 401 SUPERFAMILY Ribokinase-like 21 372 IPR029056 -
Artr3g12524 401 PRINTS Ribokinase signature 252 263 IPR002139 GO:0016301(InterPro)
Artr3g12524 401 PRINTS Ribokinase signature 22 43 IPR002139 GO:0016301(InterPro)
Artr3g12524 401 PRINTS Ribokinase signature 192 207 IPR002139 GO:0016301(InterPro)
Artr3g12524 401 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 53 77 IPR002173 GO:0016301(InterPro)
Artr3g12524 401 Gene3D - 15 390 IPR029056 -
Artr3g12524 401 PANTHER ZGC:136858 23 384 - -
Artr3g12524 401 Pfam pfkB family carbohydrate kinase 19 272 IPR011611 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12524 - -