AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12535 ATGTCGATACTAGGTTCTAATATCCCTAGCGAGGTTGGCTTGAAGTTGCTTCTTTGCCCACTTGGGTCCAACATCATCTTAAAAACAGCATGTTGTTCAGTGGGAGTTATTTTACCTGTTTATTCTACTTTTAAAGCGATTGAGACGAATAACAGAACTGATCAACAAAAGATGCTTTTATACTGGGCAGCATATGGGACTTTTAGTATTGCAGAAACGTTTGCAGACAAAGTTATATCATGGGTTCCACTTTACCATCATATGAAGTTTGCGTTTCTTGTTTGGCTTCAGCTTCCCACAACTAATGGTGCTAAACAGATATACATGAGTCATATACGTCCTTTTCTTTTGAGGCATCAAGACAACCTCGATCATATTGTGGCGTTTTTGTACAACGAAACGGGTAAATTCGTTAGCGCCCACGAAAGTGAATTTCTATTTATCAAGGCAATCGTGATGAAGATTCTGATATCAGCAAAACATTTTGTCAACGATAGCAGTCAACCCATCCCACCGGTCCCACCACCAGAAGGTAGAGCAATCACAGACGTAAATGAACAAGCAGAGAGCATTAACTCTGATGAAGAGGATGATGATGGTTATGTAACTGTCCCTGCAACTTAA 624 40.06 MSILGSNIPSEVGLKLLLCPLGSNIILKTACCSVGVILPVYSTFKAIETNNRTDQQKMLLYWAAYGTFSIAETFADKVISWVPLYHHMKFAFLVWLQLPTTNGAKQIYMSHIRPFLLRHQDNLDHIVAFLYNETGKFVSAHESEFLFIKAIVMKILISAKHFVNDSSQPIPPVPPPEGRAITDVNEQAESINSDEEDDDGYVTVPAT* 208
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12535 207 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
Artr3g12535 207 PANTHER HVA22-LIKE PROTEINS 35 130 IPR004345 -
Artr3g12535 207 MobiDBLite consensus disorder prediction 168 207 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12535 K17279 receptor expression-enhancing protein 5/6
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:430136085 Artr7g01068 Artr-Chr7:38920786 dispersed