AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g12562 ATGGATGAAGGCAAGCGGATCACCGTTGGTGTGGGTCCCACCTCTGTTTTGGAATACCTTGATCCTAACTACTGGAATGATAGGTTTACTTCTGAGGATCATTATGAGTGGCTTAAAGATTACTCCCATTTTCGTCATCTTATTCAGCAACATATCAAACCTGCGTCTTGTGTATTGGAGCTCGGGTGTGGGAACTCACAACTGTGTGACGAGCTATATAAAGAAGGAATTACTGATCTAACCTACATTGATCTATCTTCAGTTGCAGTTGCCAAAATGCAGAAACGCCTGTTGTCAAAAGGCCTTAAAGATATTAAAGTTATGGAAGGCGACATGCTGAATCTTTCCTTTACTGATGAGTCGTTTGATGTTGTTATAGAGAAAGGAACTATGGATGTTTTGTTCGTGGACAGTGGTGACCCTTGGAACCCGCGGCCAGAGGCTGCTAACAAGGCAATGGCAATGCTTCAATGTGTTCATAGGGTTTTAAAACCTAGTGGGATTTTCATCTCAATCGCTGTTGGTCAGCCACACTTTAGGCATCTGTTATTTAATGCTCCTGAGTTTACGTGGTCAATCGAGTATTCTACATTTGGTGATGGATTCCACTACTTCTTTTATACTTTAAGGAAGGGATGCAGATCACTAGACTCCGATGCAGATATGAATAAGGTTGAGATACCATCTATTTGCCTTTATCAAGATGAATTAGATAATGAAAATTACTTATTTCGCTCCAACATTGATGAAATGGATGATGAAAGATAG 768 40.49 MDEGKRITVGVGPTSVLEYLDPNYWNDRFTSEDHYEWLKDYSHFRHLIQQHIKPASCVLELGCGNSQLCDELYKEGITDLTYIDLSSVAVAKMQKRLLSKGLKDIKVMEGDMLNLSFTDESFDVVIEKGTMDVLFVDSGDPWNPRPEAANKAMAMLQCVHRVLKPSGIFISIAVGQPHFRHLLFNAPEFTWSIEYSTFGDGFHYFFYTLRKGCRSLDSDADMNKVEIPSICLYQDELDNENYLFRSNIDEMDDER* 256
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g12562 255 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 13 212 IPR051419 -
Artr3g12562 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 209 IPR029063 -
Artr3g12562 255 CDD AdoMet-MTases 58 174 - -
Artr3g12562 255 Gene3D Vaccinia Virus protein VP39 17 227 IPR029063 -
Artr3g12562 255 FunFam EEF1A lysine methyltransferase 4 17 228 - -
Artr3g12562 255 Pfam Methyltransferase domain 54 173 IPR025714 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g12562 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:431527631 Artr5g07354 Artr-Chr5:248786602 dispersed