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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Artr3g13021 ATGGCGGACAAAAAACACACGCAACACATTTTATCAAAACAAAGATCATGGTCACCAAACATAAACCGCGACTTAGAGTGGCAGAAACTTAGTCGTAGCAAGAGTGTTAATCATGGTTTTGTCGTCACTGATGATGATGTTAAGGAGTTGAAAGCTTGTTTTGATTTAGGGTTTGGTTTTGATAAGTTGGATGATATGGACCCGAAACTTACGCGTGCTTTTCCTGCGCTCGAGCTGTATGCTGCGGTTAAAAGAGGGTATAATGGTGGTAGAATGATGTCAAGGTCTTCGTCGTCCATAAGTACTGATTCGTGTTCGAGTTCTTCTAGCGTTGCTACGTCTATTGTTGATCCAAGTGATGATCCGCAAAAGGTAAAGGCGAAATTGAAACAATGGGCTCAACTTGTTCGTTGTTCGATTCTTGAAACTTCTTCCAACGACAAAAATGTTGCACAATAG 459 41.18 MADKKHTQHILSKQRSWSPNINRDLEWQKLSRSKSVNHGFVVTDDDVKELKACFDLGFGFDKLDDMDPKLTRAFPALELYAAVKRGYNGGRMMSRSSSSISTDSCSSSSSVATSIVDPSDDPQKVKAKLKQWAQLVRCSILETSSNDKNVAQ* 153
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Artr3g13021 152 MobiDBLite consensus disorder prediction 93 117 - -
Artr3g13021 152 PANTHER OSJNBA0071G03.3 PROTEIN 9 141 - -
Artr3g13021 152 MobiDBLite consensus disorder prediction 93 122 - -
Artr3g13021 152 Pfam Protein of unknown function (DUF1685) 42 99 IPR012881 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Artr3g13021 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Artr Artr-Chr3:21638537 Artr3g13021 Artr-Chr3:450670117 dispersed
Artr Artr-Chr3:450670117 Artr7g08383 Artr-Chr7:299252870 dispersed
Artr Artr-Chr3:450670117 Artr9g03589 Artr-Chr9:147792701 transposed