Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Artr3g13029 | ATGGCGATTAATGTATCATCATCATCATCTTCGTGTGCTACATTATTACCTCCTCCTCATTGTTGTTATTCCACTAATATTCGACCTGCTTCTTCTTCTTCCTTGTTTTTTGCAAACACTAATAATAATTATTCTTTAAATGTTTCATCGATTAAACGCCGATCCGATCTACGTGTCATGTCTTCTATGCGACGACCCTTAAAAGCAACAGTAGTGACCGGACAGTCATGGAACACATCAGTTCTCGACAGCAAAACACCAGTACTAGTTGAGTTCTATGCCAGTTGGTGTGGACCATGCCAGATGGTGCACCGTGTGATTGATGAAATTGCAGGCGAGTATGCTGGTAAGGTCAAGTGTTTTGTGCTGAATGCTGACCAAGACCCACTAATCGCTGAAGAATATGACATTAAGGCTGTACCCATTGTGCTGTTATTCAAGAACGGTCAGAAATGTGAGTCGGTGGTTGGAACCATGCCTAAAGAATTCTACGTGGCTGCTATCGAAAGGGTCTTGTCATCTTCATCTTGA | 531 | 42.18 | MAINVSSSSSSCATLLPPPHCCYSTNIRPASSSSLFFANTNNNYSLNVSSIKRRSDLRVMSSMRRPLKATVVTGQSWNTSVLDSKTPVLVEFYASWCGPCQMVHRVIDEIAGEYAGKVKCFVLNADQDPLIAEEYDIKAVPIVLLFKNGQKCESVVGTMPKEFYVAAIERVLSSSS* | 177 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Artr3g13029 | 176 | Pfam | Thioredoxin | 70 | 168 | IPR013766 | - | |
| Artr3g13029 | 176 | ProSiteProfiles | Thioredoxin domain profile. | 63 | 173 | IPR013766 | - | |
| Artr3g13029 | 176 | PRINTS | Thioredoxin family signature | 88 | 96 | - | - | |
| Artr3g13029 | 176 | PRINTS | Thioredoxin family signature | 136 | 147 | - | - | |
| Artr3g13029 | 176 | PRINTS | Thioredoxin family signature | 96 | 105 | - | - | |
| Artr3g13029 | 176 | CDD | TRX-family | 80 | 169 | - | - | |
| Artr3g13029 | 176 | PANTHER | GEO12009P1 | 50 | 172 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Artr3g13029 | 176 | SUPERFAMILY | Thioredoxin-like | 70 | 174 | IPR036249 | - | |
| Artr3g13029 | 176 | FunFam | Thioredoxin | 63 | 175 | - | - | |
| Artr3g13029 | 176 | ProSitePatterns | Thioredoxin family active site. | 89 | 107 | IPR017937 | - | |
| Artr3g13029 | 176 | Gene3D | Glutaredoxin | 69 | 175 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Artr3g13029 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 22445 | Artr2g05298 | Artr3g13029 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Artr | Artr-Chr3:450757765 | Artr4g06184 | Artr-Chr4:212328755 | dispersed | |
| Artr | Artr-Chr6:437889830 | Artr3g13029 | Artr-Chr3:450757765 | transposed | |
| Artr | Artr-Chr9:251609206 | Artr3g13029 | Artr-Chr3:450757765 | transposed | |
| Artr | Artr-Chr2:171323160 | Artr3g13029 | Artr-Chr3:450757765 | wgd |